CI01000027_04551022_04551875


Basic Information

Item Value
gene id CI01000027_04551022_04551875
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4550712 ~ 4551993 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04551022_04551875.mRNA
GTATATAAGTTAGGGTTTTTTTGTTTTGTTTTTTTTACAAACTCAGCCAGAATCAGTCAAAAGCTGCTGGCTGAAGTGAAGCACCAGGGCCACCATTAGCTGTCTGTAAACAGGAGGACGCACTTCAAGTACAAAACTCTTTTAAACAGCCCACACAATACTAAACAACAGCCGAGCCATGGGGGAGGCAGGGCGAGGGTGGGTTCAAGGAGGACACATGTTGTGTAGCCATGGCTTCTCCCATGCCCCATGCAGAGAGTGAATTATCCACTTAATTTAGGATTACAGACAAGCAGCTACCGCTAGAACAATGAGAGAGTCTGATGCCGTCTTTTCATATAACATTACAAAACTCATCAGAAGGGGCATCTTCAATACAAGTACAGCTGTCACACCTCATTGTAAGCAGGGACATAAGAAAGATTCAAATGACACTAACCGTCAGACCTGCTTGATGAATTGGACCCAGTCATCATCAGCACTGCTTGTTTTGATTGTGCTCTGCTTCCACACGGAGAGGACAAATCTGTTTAATAACCGGAGAATCGCGAGCTGCCGGTTTGAGGAACTGAAACGGTTATCAAAACACGTCTATCAGAAGAACACACCCAGAACTTCACGTGCACATACGCTGAACCACGGCACACATGGCTTCTCCACAGTGAGCATTAAAGTAGTGCGCAAGAAATCAGCACCATACCCAGCATTCCATGCATGCCACTCTAGACCCTTGTACAGGTATCTGCTAAACTCCTACAGTACTCAAAAACAGAAAGAATAGACACCCAACACACACCCCAATATACAACAACAAATTACACCCTCCTCACCCTCCCACAAAATATGTATAATCAAACAATAACATACATTCTACCACGCAAAGTCCACGCCTATACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04551022_04551875.mRNA True 899 mRNA 0.44 2 4550712 4551993

Neighbor

gene id symbol gene type direction distance location
CI01000027_04537765_04549872 NA coding upstream 783 4537342 ~ 4549929 (+)
CI01000027_04497623_04499224 NA coding upstream 51364 4497623 ~ 4499348 (+)
CI01000027_04488278_04495470 FLAD1 coding upstream 54635 4488278 ~ 4496077 (+)
CI01000027_04485614_04488056 NA coding upstream 62656 4483891 ~ 4488056 (+)
CI01000027_04470309_04483532 NA coding upstream 67153 4470145 ~ 4483559 (+)
CI01000027_04655825_04667764 NA coding downstream 102790 4654783 ~ 4667867 (+)
CI01000027_04713891_04717190 NA coding downstream 161787 4713780 ~ 4717359 (+)
CI01000027_04725469_04727486 EFNA1B coding downstream 171900 4723893 ~ 4728283 (+)
CI01000027_04768212_04770488 KRTCAP2 coding downstream 216219 4768212 ~ 4770687 (+)
CI01000027_04774573_04774740 NA coding downstream 222580 4774573 ~ 4775489 (+)
G140512 NA non-coding upstream 37127 4513410 ~ 4513585 (+)
G140509 NA non-coding upstream 45560 4504854 ~ 4505152 (+)
G140465 NA non-coding upstream 120019 4428037 ~ 4430693 (+)
G140495 NA non-coding upstream 136136 4414354 ~ 4414576 (+)
G140447 NA non-coding upstream 137643 4404326 ~ 4413069 (+)
G140522 NA non-coding downstream 119114 4671107 ~ 4671477 (+)
G140587 NA non-coding downstream 140141 4692134 ~ 4692704 (+)
G140596 NA non-coding downstream 156232 4708225 ~ 4708506 (+)
G140597 NA non-coding downstream 156795 4708788 ~ 4708995 (+)
G140455 NA non-coding downstream 181715 4733708 ~ 4736668 (+)
G138953 NA other upstream 1030647 3502072 ~ 3520065 (+)
G138915 NA other upstream 1064065 3484387 ~ 3486647 (+)
G138515 NA other upstream 2873852 1664408 ~ 1676860 (+)
G138436 NA other upstream 3042896 1506961 ~ 1507816 (+)
G138290 NA other upstream 3551531 995970 ~ 999181 (+)
G140436 NA other downstream 185405 4737398 ~ 4774262 (+)
G140440 NA other downstream 228424 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 496930 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 517359 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 520069 5071693 ~ 5073136 (+)

Expression


Co-expression Network