CI01000027_04655825_04667764


Basic Information

Item Value
gene id CI01000027_04655825_04667764
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4654783 ~ 4667867 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04655825_04667764.mRNA
CTTTATAGAACGCAGCATGTGTGTTTGTGTATTAACACACCTCACGTGTTTTGTCAACTGTTCGCAGGACAGATGCTCTCCTTTAATTAAACGGATTGAGGGGGTTAATTAGAAGAACAGAAAAGAACAACGAGGGAAGAGAAGAGAGCTGCTGTTTCTCCTGTGGTGCTGATTCAGCTCTGCCATCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTTTCTCATTACAGATATGCTCTGTAGGCACAATCATTCTGCACATATGTAACTATAAGAAATGTGCATCTTACTCAAGTTCTACATGGAAAGGATGAGGATTTTAATTAATATGTGTCCAAAAACAAGCAATGGACAGTAATAATGGGATTTCTTGGTGTACTTGCAACATTTGATTAATGAAGCAAACTAAAACGCTTATATAGGCAGTTATGTTTCAGATGGTATTATTGGTTTCTTGGCTTTTGTTCTCTATAGAAGCTTTGGTCTCTGTCTTTCTCTCTCTCTCATAGTGACATTGATCCACTGAGTCTTGATCTTGCTCTAACCTGCTGCCCAGCTCAGCATCTTGTATCCTAGACCCACACAGCCCATACATTCAGCCTGTACACACATATACAATCACGTAAATCTTGTATGTATGTTATTTGAAATGTTAGCTAAATAGTTCCAATGATTTGCCCTTGTAGACAGAGGGGTTACTACTCTGAGCTGAGAAGAAAATGTGTGCCAGCCTATTTTAAATACTCCATAATTTGTTTTAATGATTTGAAATCTCCTACAGTAGGGTTAACGTTTCCTCTCTTCATCGCCCCCTCGTGGACATAACAACAACTGCAGATTGTCCATCAGTCTTCCACCTCTGACTTTACTGTCATCGCTCCCGCACTGCAAAGAAGTTTGTAAGAAAAGACAAAAAAGGCCTTTTGTTTTTTGAAAGGCTTCTTTGTGTGCTTTATCCTTGAAATACAAAACAGTAGATTTATGAAGGAAATCTGACAGGTCGCGTGGTCACAACGAAATGTGCTCGCACACATAGCCTACACTATGTACACAATTTTGGCTCATCCTGTCAGTCACTCTTTTCTTTATCTAGGCAATGGTCTCGAAGTAAGACTCGTCCCGCGAGAGCTGCATTCACTCCGCGCAAACGCTCCTCGTTGTTTATATACGTTGCGTTACGCGCGCTTTCATCAGACTCTGTCATGGAATGGTAAGACTCATTGTCAATACAGCTGTGCACTGGAGCGACTTCGTAAGGAGGGCTACACGGTGCAGGTGAATGTCAATGACTATCTGGATATCTACTGTCCTCATTACAACAGCAGCCAGAGAGGCGTGGCCGAGCAGTACGTACTTTACATGGTCAGTTATCGTGGTTACCGTACGTGTGACCCGCAGCTGGGCTTCAAACGCTGGGAGTGTAACCGTCCCCACGCCCCACATGCACCAATCAAATTCTCTGAAAAGTTCCAGCGCTACAGCGCCTTCTCGCTCGGCTATGAGTTCCACGTTGGGCAGGAGTATTATTATATCTCCACACCCACTCATCACCACGGGCGGAGCTGCCTGAGATTAAGAGTGTATGTCTGCTGCTCAACAGTGCTCATGTTCATTAATAATATTCCAGCTCAGTGTATGAATGTGAGAGAGAGAGAAAGAGAGAGCAAACTGTGTGCTGTCTTAACCTCTGCCCTCTCTCTTGGAGTCTCTGAGTTCTTGTGTCAAGATGAATCTGTTAGTCCTGCTCAGTCAGCATCTGATTCAGATGATGAGCCCCAGCCCAGAGAGCCAGACTACACTCTAAGACCCAACATCAAAATCGATGACCTCGATGACTATGATAATCCCGAGGTCCCTAAATTGGAGAAGAGCATCAGCGGTAGCAGTCCATCCAGAGATCGCCTTCTCCTAACCGTGGCATCACTTTTCTTCATCACCCTCTCGGTCTCCTAGCATCCACCTCCTATCCGTCACAACACCAACGAGGCCTTGAGGGGGGAAAGGAAGGATCTAGGGCCGACAAGTTTGCAGATAAAAACTTGGAAAGGAACAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04655825_04667764.mRNA True 2054 mRNA 0.45 7 4654783 4667867

Neighbor

gene id symbol gene type direction distance location
CI01000027_04551022_04551875 NA coding upstream 102790 4550712 ~ 4551993 (+)
CI01000027_04537765_04549872 NA coding upstream 104854 4537342 ~ 4549929 (+)
CI01000027_04497623_04499224 NA coding upstream 155435 4497623 ~ 4499348 (+)
CI01000027_04488278_04495470 FLAD1 coding upstream 158706 4488278 ~ 4496077 (+)
CI01000027_04485614_04488056 NA coding upstream 166727 4483891 ~ 4488056 (+)
CI01000027_04713891_04717190 NA coding downstream 45913 4713780 ~ 4717359 (+)
CI01000027_04725469_04727486 EFNA1B coding downstream 56026 4723893 ~ 4728283 (+)
CI01000027_04768212_04770488 KRTCAP2 coding downstream 100345 4768212 ~ 4770687 (+)
CI01000027_04774573_04774740 NA coding downstream 106706 4774573 ~ 4775489 (+)
CI01000027_04777135_04777760 NA coding downstream 108620 4776487 ~ 4779338 (+)
G140512 NA non-coding upstream 141198 4513410 ~ 4513585 (+)
G140509 NA non-coding upstream 149631 4504854 ~ 4505152 (+)
G140465 NA non-coding upstream 224090 4428037 ~ 4430693 (+)
G140495 NA non-coding upstream 240207 4414354 ~ 4414576 (+)
G140447 NA non-coding upstream 241714 4404326 ~ 4413069 (+)
G140522 NA non-coding downstream 3240 4671107 ~ 4671477 (+)
G140587 NA non-coding downstream 24267 4692134 ~ 4692704 (+)
G140596 NA non-coding downstream 40358 4708225 ~ 4708506 (+)
G140597 NA non-coding downstream 40921 4708788 ~ 4708995 (+)
G140455 NA non-coding downstream 65841 4733708 ~ 4736668 (+)
G138953 NA other upstream 1134718 3502072 ~ 3520065 (+)
G138915 NA other upstream 1168136 3484387 ~ 3486647 (+)
G138515 NA other upstream 2977923 1664408 ~ 1676860 (+)
G138436 NA other upstream 3146967 1506961 ~ 1507816 (+)
G138290 NA other upstream 3655602 995970 ~ 999181 (+)
G140436 NA other downstream 69531 4737398 ~ 4774262 (+)
G140440 NA other downstream 112550 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 381056 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 401485 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 404195 5071693 ~ 5073136 (+)

Expression


Co-expression Network