CI01000027_04713891_04717190


Basic Information

Item Value
gene id CI01000027_04713891_04717190
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4713780 ~ 4717359 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04713891_04717190.mRNA
GTATAAATAGTTTCTGCAGGTGCCCGAAGGGCAGACACAGCTTGAAGCGTGTAAAGGTTGACCAAAGTTTGTCAATATTATTATTGTTGCCAGTTCTTTTGTTGCATAACTATGGAGCTAATTTTGCATGTCAGGCAACTAACAAACAAAGTGACGCATTGCTCTCAAAGCAGACGGAAAAGCACCCTCACCTCACTCATATATACACACTCAGCCTTGACTAATCGTCCCAAACTGAAGCCTCCAACAACATGGAACATGCATGAACCTGCCCAGCCCTGCCTAGCCCAGCCCAAAATAGTCCGCAGAGCATTATATCCCGGACTCAATGGATGTTCTGTGGCTGGTGTGTCTTGCGGTGAGCGTCAGCGCCTGGTACGCGTCTGCGGAGCGACACAGTGTTTACTGGAACAGCTCGAACGCAAAAGACAGCAGCTGGGCAGAGAAGTACATGGAAAGAAACCAGACAGATGGACAGACAGATCAGCCTAAATATATACACACACATGTTAGTTTTACTATAGGCCTATTTGTGCGGGCATCTTATTGACAGACATGATATTTACCATACTGTATCCTTCACACAAACCTGTAGATGTACAGCAAAACATATTTTTTTTAGTAAATATAGCCAAACTTTTACAGATACATATAGAAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04713891_04717190.mRNA True 661 mRNA 0.44 4 4713780 4717359

Neighbor

gene id symbol gene type direction distance location
CI01000027_04655825_04667764 NA coding upstream 45913 4654783 ~ 4667867 (+)
CI01000027_04551022_04551875 NA coding upstream 161787 4550712 ~ 4551993 (+)
CI01000027_04537765_04549872 NA coding upstream 163851 4537342 ~ 4549929 (+)
CI01000027_04497623_04499224 NA coding upstream 214432 4497623 ~ 4499348 (+)
CI01000027_04488278_04495470 FLAD1 coding upstream 217703 4488278 ~ 4496077 (+)
CI01000027_04725469_04727486 EFNA1B coding downstream 6534 4723893 ~ 4728283 (+)
CI01000027_04768212_04770488 KRTCAP2 coding downstream 50853 4768212 ~ 4770687 (+)
CI01000027_04774573_04774740 NA coding downstream 57214 4774573 ~ 4775489 (+)
CI01000027_04777135_04777760 NA coding downstream 59128 4776487 ~ 4779338 (+)
CI01000027_04835989_04851147 SNX27.L, SNX27B, SNX27, SNX27A coding downstream 118630 4835989 ~ 4851178 (+)
G140597 NA non-coding upstream 4785 4708788 ~ 4708995 (+)
G140596 NA non-coding upstream 5274 4708225 ~ 4708506 (+)
G140587 NA non-coding upstream 21076 4692134 ~ 4692704 (+)
G140522 NA non-coding upstream 42303 4671107 ~ 4671477 (+)
G140512 NA non-coding upstream 200195 4513410 ~ 4513585 (+)
G140455 NA non-coding downstream 16349 4733708 ~ 4736668 (+)
G140435 NA non-coding downstream 19535 4736894 ~ 4822645 (+)
G140436 NA non-coding downstream 59845 4737398 ~ 4774262 (+)
G140475 NA non-coding downstream 107581 4824940 ~ 4825988 (+)
G140633 NA non-coding downstream 115653 4833012 ~ 4833260 (+)
G138953 NA other upstream 1193715 3502072 ~ 3520065 (+)
G138915 NA other upstream 1227133 3484387 ~ 3486647 (+)
G138515 NA other upstream 3036920 1664408 ~ 1676860 (+)
G138436 NA other upstream 3205964 1506961 ~ 1507816 (+)
G138290 NA other upstream 3714599 995970 ~ 999181 (+)
G140440 NA other downstream 63058 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 331564 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 351993 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 354703 5071693 ~ 5073136 (+)

Expression


Co-expression Network