CI01000027_04774573_04774740



Basic Information


Item Value
gene id CI01000027_04774573_04774740
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4774573 ~ 4775489 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000027_04774573_04774740.mRNA
TCTCAGAAGGACCCTGCTGCCATAGACAGGATTATGAAGGATCTGGACTCTAATGGAGATGGAGAGGTGAATTTTGAAGAGTTTGTGTCTCTTGTGGTGGGCCTGTCCATTGCCTGTGAACAGCTCTACCAGAAGCAGATACAAGCAGCGGGTGTCAAAAAGCATTAAATAGCCAAACATGAAGGGAAAAAGGAATGTCTGTTTTTCTGTTTCGTCATTTTGTTAATATATTTTACGCTTTCAGCCACATGCCTCGATTTGAAGTTGTTACTACAGTTACACTGTATGTATGTATGTTTTGTCATTTTTGTCTAGTGATGTTCAAATTTACTTGTAGTTTTTATAAGTATTTGCATTAGACACAAAATATATCGTTCTCAGAAGTCCTGTAAGTTTCACCATGGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000027_04774573_04774740.mRNA False 406 mRNA 0.38 1 4774573 4774978

Neighbor


gene id symbol gene type direction distance location
CI01000027_04768212_04770488 KRTCAP2 coding upstream 3886 4768212 ~ 4770687 (+)
CI01000027_04725469_04727486 EFNA1B coding upstream 46290 4723893 ~ 4728283 (+)
CI01000027_04713891_04717190 NA coding upstream 57214 4713780 ~ 4717359 (+)
CI01000027_04655825_04667764 NA coding upstream 106706 4654783 ~ 4667867 (+)
CI01000027_04551022_04551875 NA coding upstream 222580 4550712 ~ 4551993 (+)
CI01000027_04777135_04777760 NA coding downstream 1509 4776487 ~ 4779338 (+)
CI01000027_04835989_04851147 SNX27.L, SNX27B, SNX27, SNX27A coding downstream 61011 4835989 ~ 4851178 (+)
CI01000027_04860802_04872130 NA coding downstream 85824 4860802 ~ 4872566 (+)
CI01000027_04887494_04956477 KCNN3 coding downstream 112338 4887316 ~ 4957488 (+)
CI01000027_04978217_04987503 NA coding downstream 203239 4978217 ~ 4987503 (+)
G140455 NA non-coding upstream 37905 4733708 ~ 4736668 (+)
G140597 NA non-coding upstream 65578 4708788 ~ 4708995 (+)
G140596 NA non-coding upstream 66067 4708225 ~ 4708506 (+)
G140587 NA non-coding upstream 81869 4692134 ~ 4692704 (+)
G140522 NA non-coding upstream 103096 4671107 ~ 4671477 (+)
G140436 NA non-coding downstream 2226 4737398 ~ 4774262 (+)
G140475 NA non-coding downstream 49962 4824940 ~ 4825988 (+)
G140633 NA non-coding downstream 58034 4833012 ~ 4833260 (+)
G140454 NA non-coding downstream 98137 4873115 ~ 4874023 (+)
G140640 NA non-coding downstream 107102 4882080 ~ 4882366 (+)
G138953 NA other upstream 1254508 3502072 ~ 3520065 (+)
G138915 NA other upstream 1287926 3484387 ~ 3486647 (+)
G138515 NA other upstream 3097713 1664408 ~ 1676860 (+)
G138436 NA other upstream 3266757 1506961 ~ 1507816 (+)
G138290 NA other upstream 3775392 995970 ~ 999181 (+)
G140440 NA other downstream 5439 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 273945 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 294374 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 297084 5071693 ~ 5073136 (+)
G140862 NA other downstream 937634 5712612 ~ 5712702 (+)

Expression



Co-expression Network