XLOC_008529


Basic Information

Item Value
gene id XLOC_008529
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25094836 ~ 25095298 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018966
GGGACACAAAGAATGACGTTTCGTTTAGTTAGGTTTGTTGTGACTTGTTTCCAAAACTTAAATGAAAACATCAATCTAACTCTTCAACGAGGTCAAACAAAGTTATATGGATCAGCTAAACTCCAAAGATAGAGGTATGACACTTCAGTGTAAAACAGCAGATGAACACCTGAGCATCTCTGTGCAGTCCAAGGAAAGAATGAGAACAAGAAGAAGGATGAAGAAAAGGCCAAAGACATCCATGATGAGTGAGTCTCAGGAGAGCCTGAGGTGGGCAGCGGAGCTGTCAGACCCTGTGGAAGAGGAAAAGAGGATCGAGCTTTATAAAACCAACAGAAGGAAGCGCTATCAGGCCGCTCAAGAAGGTCTTTTGAAAAATTTGGTGTCTGGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018966 True 391 lncRNA 0.43 2 25094836 25095298

Neighbor

gene id symbol gene type direction distance location
XLOC_008528 BX908796.5 coding upstream 25481 25063306 ~ 25069355 (+)
XLOC_008526 BX908796.1 coding upstream 32763 25055961 ~ 25062073 (+)
XLOC_008527 zgc:136683 coding upstream 34182 25059584 ~ 25060654 (+)
XLOC_008525 BX908796.2 coding upstream 40106 25028482 ~ 25054730 (+)
XLOC_008524 NA coding upstream 41522 25007555 ~ 25053314 (+)
XLOC_008530 slc35f2l coding downstream 60823 25156121 ~ 25169613 (+)
XLOC_008531 NA coding downstream 113094 25208392 ~ 25209842 (+)
XLOC_008532 NA coding downstream 275269 25370567 ~ 25377494 (+)
XLOC_008533 NA coding downstream 300603 25395901 ~ 25399574 (+)
XLOC_008534 aifm4 coding downstream 343416 25438714 ~ 25448626 (+)
XLOC_008463 BX663520.1 misc upstream 3842554 21252191 ~ 21252282 (+)
XLOC_008536 CU856359.1 non-coding downstream 374431 25469729 ~ 25469845 (+)
XLOC_008539 NA non-coding downstream 473639 25568937 ~ 25570599 (+)

Expression


Co-expression Network