XLOC_008530 (slc35f2l)


Basic Information

Item Value
gene id XLOC_008530
gene name slc35f2l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25156121 ~ 25169613 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017057
ATGCCTCGGGAGCAGCTGAACACTCTCTGCTTTAAAATGAGAGAAGGATTGCCTAAATGGAGAGATGTTTTCACATGGCAGCTGTTGAAGATTCTGCTGATGGGACAAGGCCTCTCAGCTCTGATCTGTGGCACTGCTGTAACATCACAGTATCTGGCATCCGTTTACTATCTGAATACCCCTATGCTGCAGAGCTTTATTAACTACACACTCCTGGGCATCACTTACACCATGGCACTTATCTTCAGAAGAGGTGATGGAAATATTTTGCAGATATTAAAGACAAAATGGTGGAAGTATCTATTGTTGGCGGTGGCAGATGTGGAGGCAAATTATGCAGTGGTGAAAGCATACCAGTACACCACATTAACCAGCATACAGCTGCTGGACTGCTTTATTATCCCAGTTTTAATGATCTTGTCCTGGTTCTTCCTGAAGACCCGCTACAGGATCATTCATTATGCAGCTGTAGGCATCTGTCTGGCCGGGGTGGGAGCCATGGTGGGAGCAGACATCCTCGCTGGACAAGACCAGGGATCATCCAGTGACGTGCTCCTGGGTGATGGTCTGGTTTTAGTTAGTGCCACTCTGTATGCCATCTCTAATGTGTGCCAGGAATACACAGTGAAGAATCTGAGCCGGGTGGAGTTTCTGGGGATGGTTGGCCTCTTTGGGTCTATTATCAGCGCAATCCAACTAGGGATTCTAGAACATAAAGAAGTGGCTAACATTCAGTGGACATGGGAAAAGGCTCTTCTCTTGTCTGGATATGCGCTCTGTATGTACGGCTTCTATAGCTTCATGCCTGTGGTGATAAAAAGGAGCAGTGCCACAGCGGTTAACCTTTCCTTACTCACCGGAGACCTCTTCAGCCTGTTCTTTGGGCTCTTTTTGTTCCATTATAACTTCTCAGGCTTGTACATCGTGTCGTTGGTGGGAATCCTCATTGGGTTCATCATGTTTAACACCGTTCCGACGTTAACGGACACTGACAACAACAGTATTGAAGGCTGTGAGGGAGAGATCAGCTGTGCACATGCAGAGCAGAGAGAAACACCACCAGCATGTGCCGTCATAAACAGTGTCAAACTCTAG
>TCONS_00017058
atgctgtcacctcacagcaataaagtcattggtttaagcctcggctgggttagttggcgtttctgtgtggagtttgcatgttctccctTGGATGTTGATTGCAGGCAGCTGTTGAAGATTCTGCTGATGGGACAAGGCCTCTCAGCTCTGATCTGTGGCACTGCTGTAACATCACAGTATCTGGCATCCGTTTACTATCTGAATACCCCTATGCTGCAGAGCTTTATTAACTACACACTCCTGGGCATCACTTACACCATGGCACTTATCTTCAGAAGAGGTGATGGAAATATTTTGCAGATATTAAAGACAAAATGGTGGAAGTATCTATTGTTGGCGGTGGCAGATGTGGAGGCAAATTATGCAGTGGTGAAAGCATACCAGTACACCACATTAACCAGCATACAGCTGCTGGACTGCTTTATTATCCCAGTTTTAATGATCTTGTCCTGGTTCTTCCTGAAGACCCGCTACAGGATCATTCATTATGCAGCTGTAGGCATCTGTCTGGCCGGGGTGGGAGCCATGGTGGGAGCAGACATCCTCGCTGGACAAGACCAGGGATCATCCAGTGACGTGCTCCTGGGTGATGGTCTGGTTTTAGTTAGTGCCACTCTGTATGCCATCTCTAATGTGTGCCAGGAATACACAGTGAAGAATCTGAGCCGGGTGGAGTTTCTGGGGATGGTTGGCCTCTTTGGGTCTATTATCAGCGCAATCCAACTAGGGATTCTAGAACATAAAGAAGTGGCTAACATTCAGTGGACATGGGAAAAGGCTCTTCTCTTGTCTGGATATGCGCTCTGTATGTACGGCTTCTATAGCTTCATGCCTGTGGTGATAAAAAGGAGCAGTGCCACAGCGGTTAACCTTTCCTTACTCACCGGAGACCTCTTCAGCCTGTTCTTTGGGCTCTTTTTGTTCCATTATAACTTCTCAGGCTTGTACATCGTGTCGTTGGTGGGAATCCTCATTGGGTTCATCATGTTTAACACCGTTCCGACGTTAAGCAGACTTTCTGACCCGCTGTCTGATGAAGAAGGTGTTGACAATCACACAGCGGACACTGACAACAACAGTATTGAAGGCTGTGAGGGAGAGATCAGCTGTGCACATGCAGAGCAGAGAGAAACACCACCAGCATGTGCCGTCATAAACAGTGTCAAACTCTAG
>TCONS_00017059
CTGTTGAAGATTCTGCTGATGGGACAAGGCCTCTCAGCTCTGATCTGTGGCACTGCTGTAACATCACAGTATCTGGCATCCGTTTACTATCTGAATACCCCTATGCTGCAGAGCTTTATTAACTACACACTCCTGGGCATCACTTACACCATGGCACTTATCTTCAGAAGAGGTGATGGAAATATTTTGCAGATATTAAAGACAAAATGGTGGAAGTATCTATTGTTGGCGGTGGCAGATGTGGAGGCAAATTATGCAGTGGTGAAAGCATACCAGTACACCACATTAACCAGCATACAGCTGCTGGACTGCTTTATTATCCCAGTTTTAATGATCTTGTCCTGGTTCTTCCTGAAGACCCGCTACAGGATCATTCATTATGCAGCTGTAGGCATCTGTCTGGCCGGGGTGGGAGCCATGGTGGGAGCAGACATCCTCGCTGGACAAGACCAGGGATCATCCAGTGACGTGCTCCTGGGTGATGGTCTGGTTTTAGTTAGTGCCACTCTGTATGCCATCTCTAATGTGTGCCAGGAATACACAGTGAAGAATCTGAGCCGGGTGGAGTTTCTGGGGATGGTTGGCCTCTTTGGGTCTATTATCAGCGCAATCCAACTAGGGATTCTAGAACATAAAGAAGTGGCTAACATTCAGTGGACATGGGAAAAGGCTCTTCTCTTGTCTGGATATGCGCTCTGTATGTACGGCTTCTATAGCTTCATGCCTGTGGTGATAAAAAGGAGCAGTGCCACAGCGGTTAACCTTTCCTTACTCACCGGAGACCTCTTCAGCCTGTTCTTTGGGCTCTTTTTGTTCCATTATAACTTCTCAGGCTTGTACATCGTGTCGTTGGTGGGAATCCTCATTGGGTTCATCATGTTTAACACCGTTCCGACGTTAAGCAGACTTTCTGACCCGCTGTCTGATGAAGAAGGTGTTGACAATCACACAGCGGACACTGACAACAACAGTATTGAAGGCTGTGAGGGAGAGATC

Function

symbol description
slc35f2l Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-130530-1004 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000090686

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017057 False 1095 mRNA 0.47 9 25156121 25169613
TCONS_00017058 False 1173 mRNA 0.47 8 25156382 25169613
TCONS_00017059 True 996 mRNA 0.47 7 25158104 25169544

Neighbor

gene id symbol gene type direction distance location
XLOC_008529 NA coding upstream 60823 25094836 ~ 25095298 (+)
XLOC_008528 BX908796.5 coding upstream 86766 25063306 ~ 25069355 (+)
XLOC_008526 BX908796.1 coding upstream 94048 25055961 ~ 25062073 (+)
XLOC_008527 zgc:136683 coding upstream 95467 25059584 ~ 25060654 (+)
XLOC_008525 BX908796.2 coding upstream 101391 25028482 ~ 25054730 (+)
XLOC_008531 NA coding downstream 38779 25208392 ~ 25209842 (+)
XLOC_008532 NA coding downstream 200954 25370567 ~ 25377494 (+)
XLOC_008533 NA coding downstream 226288 25395901 ~ 25399574 (+)
XLOC_008534 aifm4 coding downstream 269101 25438714 ~ 25448626 (+)
XLOC_008535 pak4 coding downstream 282479 25452092 ~ 25486010 (+)
XLOC_008463 BX663520.1 misc upstream 3903839 21252191 ~ 21252282 (+)
XLOC_008536 CU856359.1 non-coding downstream 300116 25469729 ~ 25469845 (+)
XLOC_008539 NA non-coding downstream 399324 25568937 ~ 25570599 (+)

Expression


Co-expression Network