CI01000027_05071693_05072917


Basic Information

Item Value
gene id CI01000027_05071693_05072917
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5071693 ~ 5073136 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05071693_05072917.mRNA
ATGATGGTTGCTGCATGTGCTGCTGAACCAAAAACCACCATGCTGTTGAACTTATCTGAACGTGAATTGATACAAATACAGCATTGCTGGAGCAAGTCGGCACTCTTCAAAGAAAACACAGAACCAAAGACAACCTCATCGCAAAAGCCTCAGAAAAACAACAACAATGCTGGACTTCTTGAAAGAGCACAGCAGGTGTACAGGGACACAAAGACTAAAGTTCTAAATGTTGGCAGCACAGTGGCTGGTTTTGCTGGCATGTACTATGAGGAACATCTCAAACCTGTAGCTGACTCTTACATGGAGTGGGCTAAAGATGGTGCAAGCTCCCTTTGGGAGAAGCTGAAAAGCAAAGTGCCCACCTTCAGATCAACCCAAGATGAATAAGCAGAACAGACCTTCAAGGACGATCAAACCACATATAAGTTTTAAGTATACTGATATTGTGGATATTAATACCTCCAATGTAGTCATTTCATTGCAATAATGCAAATATGACTTAACGTAAAAAGAGAAAGTGCAACTAAACTGTGCAACTAGAAAGAAGAAGAAAGAAGAATGTTTCCTTTTAACACCAAACTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05071693_05072917.mRNA False 582 mRNA 0.40 4 5071693 5073112

Neighbor

gene id symbol gene type direction distance location
CI01000027_05069310_05070638 NA coding upstream 1041 5067917 ~ 5070868 (+)
CI01000027_05061061_05063086 APOEB coding upstream 8279 5059739 ~ 5063414 (+)
CI01000027_05050310_05055447 NA coding upstream 15938 5050310 ~ 5055755 (+)
CI01000027_05018992_05033275 NA coding upstream 37403 5018260 ~ 5034290 (+)
CI01000027_04978217_04987503 NA coding upstream 84190 4978217 ~ 4987503 (+)
CI01000027_05074328_05075547 NA coding downstream 1216 5074328 ~ 5075740 (+)
CI01000027_05082223_05082843 APOC2 coding downstream 8504 5081616 ~ 5083193 (+)
CI01000027_05157946_05159188 NA coding downstream 83021 5156133 ~ 5159246 (+)
CI01000027_05205628_05209568 NA coding downstream 131975 5205087 ~ 5210170 (+)
CI01000027_05272101_05283619 NA coding downstream 197219 5270331 ~ 5283941 (+)
G140674 NA non-coding upstream 32206 5039241 ~ 5039487 (+)
G140672 NA non-coding upstream 32895 5038545 ~ 5038798 (+)
G140437 NA non-coding upstream 80146 4975727 ~ 4991547 (+)
G140645 NA non-coding upstream 185875 4885619 ~ 4885818 (+)
G140683 NA non-coding downstream 29279 5102391 ~ 5108232 (+)
G140685 NA non-coding downstream 36707 5109819 ~ 5114502 (+)
G140684 NA non-coding downstream 45356 5118468 ~ 5164862 (+)
G140680 NA non-coding downstream 124514 5197626 ~ 5201086 (+)
G140734 NA non-coding downstream 130084 5203196 ~ 5203505 (+)
G140440 NA other upstream 286033 4780417 ~ 4785660 (+)
G140436 NA other upstream 292355 4737398 ~ 4774262 (+)
G138953 NA other upstream 1551628 3502072 ~ 3520065 (+)
G140862 NA other downstream 639500 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 683870 5756982 ~ 5758881 (+)
G140924 NA other downstream 890094 5963206 ~ 5965326 (+)
G141052 NA other downstream 1198255 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1633265 6705983 ~ 6708513 (+)

Expression


Co-expression Network