CI01000027_05157946_05159188


Basic Information

Item Value
gene id CI01000027_05157946_05159188
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5156133 ~ 5159246 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05157946_05159188.mRNA
CTATAAAGAGGAAGGAGGGAAGGAGAGAGAATGAGAGCAACCTCCCCAAAAAATTATTTTCTTTGTCATGATTTCCACTGAAAATGAACATCTTTAAAATAAGATAAATGTATTTAAGAAGCAAAGAAAATTGTCAAAGAAATTGTTGAATTAAGTTTATTTTCCCTTCCTTATTTGCAAAAATAGGCTATATGTTAGCAAGGGTGCATTAAATTGATCAAAAGTGATAGTTAAGACATTTATAAAGTTTCATGTTAAAGAAATGCTATTCTTTTGAACTTTTTATTCATCAAAGAATCCTGAAAAAATGTATCAAAGTTTCCACAAAAATATTAAGCAGCACAAGTATTTTCAACACTGATAATAATAAGAAGAAATGTTTACTGAGTAGCAAATAAGCATATTATAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATCACAGAATAAATTACATTTTAAAATATAATAAAATAGAAAACACTTATTTTAAGTTGTAATAATTTCACAATATTTTTACAGTATTTTGTGTGTAGAGTGTTTAGAAAGATAGATATTCTCTGTGAAAACAAGTCTTATGCAATCATTTGTAATTTTGCTAATAAAGTACATTTATCATGTTTTAATGATGTTTACATACTCTCAGTGGGAAAACGAGATAAAAACACTGAAGTGAATTTTTAAAGAGCAAGCGGAAGAAGTTGGTAATACGAGTCTTCAGCTCCTTGCTATATAACTTTTTCTAGTGCTGGTCATATTTAAAGTCATGTTCACACAGGTTTTACAGCACACGGGACAGCAAAGTGTGTGTTACAGAGACAGAGCAGGCTGTGGGGGTTGAGGTTGAGTAAAGCAAGAGACGCTCTTCTCCCGCAGGTAATCACCTGAACGTGTCTCCTGAATGAAAAGTGATCTGTCACCCAATCTTGGCGTGTGAACGGGGAAGCCCCAATCTCAGACATTCAAACCCTCCCCAAATGTCTGTCTGACTCGCACACAATCCCTTTGGTCATGTAATGTGCAAATATTATAAATGTTGTTTTACATAGTTGAATGGCCAGAAACCACCTTGCTATTTTGCAGCATTTTTCAGTCATGTAATATAATGCACCTCAGACACATACATACTCACAAATGCACTCCATCCATTTTAAATTCACCAGAGGGCCTTGTGGTGCTTCACGGGTCAAGCACTGTTAAAGCAACAATGTGGCTAGTCAAACAGTGACAATTTTCATTGAAGAGGTTAACAATGCTCGGCTAACCATTAACCATTCTTTTTAAAAATGGCAAAAATAGTGTCTCTTGGGGGAAAAAAGTGCCCTTCATGTTAAAGGCACATGCTGTGCAAATGGAAAAAAGAATGATATGATAAATCACAATAGGAAACACACAAACTCAAACACAAAAGTCTAGTTTCACCCACTGAGCTATGATTAACCCAAACAATATTTAAACAGTGATAAAAAAAAAAGTGTGTGATATGGAAGTGAACATCAAATAAGGACCAAACTTTTTTACATTTCTTGCAACTGAACGATTTGCGAGTATGTTTTTCAGGTGGTGCGAGTGCAAACAAAAGATCAGGATTACAAATAGTGTTTGTGTGTGTAATCTTCAGCGAGACCACATCTTGAAGGGTCTGTCGAGTGCGGGGCAGTGAATAGCTCAGCCCGGGGGTGCGCTCGACTAACCAAACAGCCGTAAGCTGAGGGCTATAAAGGCTTTTCTCTCCCTTGCGTCAGTAGACTGTTCTCCGGGGAATGTTTGCCAGATGATAGTATGAAGACAATGGGCACAGTCTGTGTGAGGAAAGGGATGTTTGAAGACTTCTTAAACAAGTACTGTTTCAACATTACTATGTTTTCAGTCACGTCAGGATGCTTTGTAGTGTGGGCAGTGTATTTGAATGCTGAAGGACTAGGCAGGACCGAGATTTCAGGAAAAATGGGTGGATTGGTGGGGGGCTTGAATTCAGATGGAGAAGAAGAGGGGAGGAGAGATGGAGGGATGCTGCTTTCTTTTTTGAAGGAATGACTCTATCAGCAGTGCTGGTTATAAATTCTGAGTGAAAAAGCTCAGCAGGTCTGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05157946_05159188.mRNA True 2117 mRNA 0.37 2 5156133 5159246

Neighbor

gene id symbol gene type direction distance location
CI01000027_05082223_05082843 APOC2 coding upstream 72940 5081616 ~ 5083193 (+)
CI01000027_05074328_05075547 NA coding upstream 80393 5074328 ~ 5075740 (+)
CI01000027_05071693_05072917 NA coding upstream 83021 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA coding upstream 85481 5067917 ~ 5070868 (+)
CI01000027_05061061_05063086 APOEB coding upstream 92719 5059739 ~ 5063414 (+)
CI01000027_05205628_05209568 NA coding downstream 45841 5205087 ~ 5210170 (+)
CI01000027_05272101_05283619 NA coding downstream 111085 5270331 ~ 5283941 (+)
CI01000027_05398796_05408689 NA coding downstream 239162 5398408 ~ 5410067 (+)
CI01000027_05444238_05445884 NA coding downstream 284637 5443883 ~ 5446211 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 300347 5459593 ~ 5472892 (+)
G140685 NA non-coding upstream 41631 5109819 ~ 5114502 (+)
G140683 NA non-coding upstream 47901 5102391 ~ 5108232 (+)
G140674 NA non-coding upstream 116646 5039241 ~ 5039487 (+)
G140672 NA non-coding upstream 117335 5038545 ~ 5038798 (+)
G140437 NA non-coding upstream 164586 4975727 ~ 4991547 (+)
G140680 NA non-coding downstream 38380 5197626 ~ 5201086 (+)
G140734 NA non-coding downstream 43950 5203196 ~ 5203505 (+)
G140748 NA non-coding downstream 64381 5223627 ~ 5239327 (+)
G140837 NA non-coding downstream 207788 5367034 ~ 5367304 (+)
G140838 NA non-coding downstream 208137 5367383 ~ 5367631 (+)
CI01000027_05050310_05055447 NA other upstream 100194 5050310 ~ 5055755 (+)
G140440 NA other upstream 370473 4780417 ~ 4785660 (+)
G140436 NA other upstream 376795 4737398 ~ 4774262 (+)
G140862 NA other downstream 553366 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 597736 5756982 ~ 5758881 (+)
G140924 NA other downstream 803960 5963206 ~ 5965326 (+)
G141052 NA other downstream 1112121 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1547131 6705983 ~ 6708513 (+)

Expression


Co-expression Network