XLOC_008531


Basic Information

Item Value
gene id XLOC_008531
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25208392 ~ 25209842 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018967
TAAGCCACCGCCCTTAAAAGCAAGCAGGGCTTGCAATTCCAAAAACTTCGCCGCCTCTAAAAGCGTCTCGATACTCATCTCGGTTTTGTTTTATGGTCCAAGAAACGATTGGAGAAATGAATCAGCTCTCTGGATTCAAACGCTTCAGTTCGGGACCCAATCTTCTCgtctgtttaataaaataataataaaataaaaggaaagaCGTGACTGGATCCCCCGTGAAGTCACACTCTTCCACGCACGTAGAGGAGTCACAACAAGATGGCGGGTTATTCAGTCAACATATCGGGCCATTGTACAGACAGCTCGGTCACGCCCCCTGCTTCAGTGACCCCGCCCTACACATGCTGGGCTTTCAAAACACGGACATGGATATTTCTTATCAACGCGTTTATTCGACGAATTACACGAAAACTAAACATTGAATACAATCAGTGACTTGTATACTAATGTATTACACATATGTTGGCTAAAAGGACGAAAGCGGACCGccctaaaatagaaatgtcaaatcCAGGTTTTGCGCAATACACCTACACACACCACGCCTCTGCGTCATTAATAAAACATGAGCTCAAAGCAGCCAATAGGAAAGCAGACACACAAGGCATGGTATCTGCTCACATGGGTGTCATTCTGCGCGTCTCGCACGCCAACAACTGAGAACGAAAACGCAACCTGCAGACCGACCCGATGACGTGCTGTTTGTGATGCAGCCACGATTCAAACACACTGCGAGTATCGATTAACAGTCTGCTGTGAACAACTTCTACAACAGATAAACAACACAACAGTAGTAGAAAACATTAGGATTTAAATATCTGCCTATGAAGCAATGGACATATTCAGATACAGTTATGAAATTGTTGATTTGGAATGGAtccatatattaaaatataatttgtatgtATTGAGTCTGcaaattacagcaaaaaggtacattttgatcatttgtttttactatttaaatattgttttctatctaaatatactttatttaagcccatagccagcctattaaaaggggtggttcttttttct

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018967 True 1044 lncRNA 0.41 2 25208392 25209842

Neighbor

gene id symbol gene type direction distance location
XLOC_008530 slc35f2l coding upstream 38779 25156121 ~ 25169613 (+)
XLOC_008529 NA coding upstream 113094 25094836 ~ 25095298 (+)
XLOC_008528 BX908796.5 coding upstream 139037 25063306 ~ 25069355 (+)
XLOC_008526 BX908796.1 coding upstream 146319 25055961 ~ 25062073 (+)
XLOC_008527 zgc:136683 coding upstream 147738 25059584 ~ 25060654 (+)
XLOC_008532 NA coding downstream 160725 25370567 ~ 25377494 (+)
XLOC_008533 NA coding downstream 186059 25395901 ~ 25399574 (+)
XLOC_008534 aifm4 coding downstream 228872 25438714 ~ 25448626 (+)
XLOC_008535 pak4 coding downstream 242250 25452092 ~ 25486010 (+)
XLOC_008536 CU856359.1 coding downstream 259887 25469729 ~ 25469845 (+)
XLOC_008463 BX663520.1 misc upstream 3956110 21252191 ~ 21252282 (+)
XLOC_008525 BX908796.2 non-coding upstream 153662 25028482 ~ 25054730 (+)
XLOC_008539 NA non-coding downstream 359095 25568937 ~ 25570599 (+)
XLOC_008541 CT027805.2 non-coding downstream 457745 25667587 ~ 25667701 (+)

Expression


Co-expression Network