CI01000027_05542184_05551414


Basic Information

Item Value
gene id CI01000027_05542184_05551414
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5541415 ~ 5553150 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05542184_05551414.mRNA
ATATAAATGTAGCCACGTGCACTGTTCACTCTTGCCGTCTGGTGCTTGTGTTTGTGTAGGATTTATGTTGAAGATCTTTCTTATTACCAGATGCTGCCCATTTCACTCACCTCTGATAAAGTAAAGAGGGAATACCTACATTACCGTTTAAGGTCAAAGATTTTTTTAAAGATTCTTTTATTCAGCAAGGATGCTTTAAATTGACCAAAAGTGTCCATAAATACATTTATAAATGCTGCTCCTTTAACTTTCTATTCGTCAAAGAATGCTGAAAAATGTATCCTGGTTTCAATGAAAATAGTAAGCGGCACAACTGTTTTCAACATTGATAATAATAAGAAATGTTCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAATAATGGTGCTGAAAATTCAGCTTTGCATCACAGGAATAAATTACATTTTAAAATATATTCAAATAGAAAACAGTTATTTTAAATTGTAATAATATTTCATAATATTACCGTTTTACCGTATTTTACTATATTTTTGATCATATACATGCAGCTTTTATAAGAGACTTGTTTCTAAGACATTAAAAATCTTACCGACCCCAAACTTTTGAACGGTAGTGGATCATGTGCTCTGCTCGTCCTCATTGTTTTTCAAAACTTTATGGCTGGCTTTTTTGAAGTAAACTATTCTTTTTTTTTTTTGATTTCTTTATCTACTAAATATTCATAAATTTAAGTGAAATATAGGGAAACATAACCCAGGTGGCAACGACATATGCCACGCATAACATGTGCACTCATTAACCCTCACAGATGTTTACTTAGAGCAAAGAAAGGTCAGGAAACGGATCAAGCACAAACACTTGTGCATTGTTCAAGTTCAAGACAACGTTCAAGGTCACAGCCTGAAGGTCAGATGTCAAAGCCAGGGAAATGTGACACGTCCCTTCCCCCAACTCTTGACCGACGACCTCCTGTGTTGTGTCTGAGGTGCTTTGGTCAATCAGGCATTACCCACAAGGGGCCAACCAAAGGGGGAAAGATGGAGCGACATTTCCTCTCTAAAAATGAGGTACAAAAGATTCTATACATCCGTTGTATGCAGGGAAGCTGGGACGCATCACCTGAGATCCGCTCTGGTCCTCCTCTGGGACAGGTGTTCACTCCTCATACGACATACAGCTCAAAGGAGACCAGCTGGTCAGTGATCAGTCCCACCAACATGCCTGGCATACACACTAACCCCTCTGACGTGATTGACAACTCTGCCCTAGCAACCGCTTGGCACGTTGCCGGGCTGCCCAGGGTTGCCAGGGAATGTGTTCCCATAGCAACACGTTTAACCACTTTATTTGCCACCTTGAAATGTAGCGAAGGTTTTGCAAAGAGGCAGAAAGGGATTACTGCTGAAATTTGCCCAGGAAGAAAATGTGTGGAAAGGTGATATGATTTTTGAGAATTGTATTTAATTTTATATTTATTTTTAAAGTTTTTGAGGAGCTCTGCTGCTAGTGCTAAATGCAGGATTTTTTTTGTTGTTTTTGTAAGACTAAGCAGATTTAACTAAATCTAATTTTGCCTTTATGGTGGAGAAAGAACCCATTACTGGCTTACATTAGTCAAACAGTGCATGAAGGAGTATAAAAACATCCATTTAAAATCACAGAGATCAATATTATACATCCCTGTTCATATCATGGCTTATCATTCAGTTGATTAAGTTTAAGGTGCACACATGTGTTCACACATATGCATTTCAACCCACTCCTTGAGTCACACAGTTAGACTTCAGAGAACACAAATGTGTTCAGGATTATTGTATCCAGTTTTATATGGAAATTGTCCGTAAAGGTTCTGAAAAAGGGTGAGTGAGAGTGTAGAGAAGGAAGGAAGAGACGGATGGAAATCAGAAATCAGAAGAGATATGATTTTAAAAAATCCAGACTGGAAGAGGGGGTGTTATTAAAGCAGGAACGCATCTTGAAAGGATGATGCTGTGACATCAGTGCTGTATTTCTGCATGATTTGATTTTAAAAGAGAACAAGGGGGTGCAGAGGTCAACAGAGGAAGGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05542184_05551414.mRNA False 2070 mRNA 0.38 6 5541415 5552046

Neighbor

gene id symbol gene type direction distance location
CI01000027_05489565_05492924 NA coding upstream 48446 5489565 ~ 5492969 (+)
CI01000027_05483140_05487852 NA coding upstream 52828 5482874 ~ 5488587 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding upstream 68523 5459593 ~ 5472892 (+)
CI01000027_05444238_05445884 NA coding upstream 95204 5443883 ~ 5446211 (+)
CI01000027_05398796_05408689 NA coding upstream 131348 5398408 ~ 5410067 (+)
CI01000027_05563090_05579132 NA coding downstream 9925 5560351 ~ 5579146 (+)
CI01000027_05612215_05613339 FPR1 coding downstream 59208 5611254 ~ 5613416 (+)
CI01000027_05624635_05626386 NA coding downstream 72480 5624526 ~ 5626605 (+)
CI01000027_05654573_05657504 NA coding downstream 102527 5654573 ~ 5657504 (+)
CI01000027_05657678_05659351 NA coding downstream 105632 5657678 ~ 5659351 (+)
G140933 NA non-coding upstream 62200 5478962 ~ 5479215 (+)
G140843 NA non-coding upstream 128680 5412427 ~ 5412735 (+)
G140832 NA non-coding upstream 129113 5411282 ~ 5412302 (+)
G140739 NA non-coding upstream 164879 5370761 ~ 5376536 (+)
G140838 NA non-coding upstream 173784 5367383 ~ 5367631 (+)
G140929 NA non-coding downstream 14521 5566567 ~ 5567653 (+)
G140920 NA non-coding downstream 50483 5602529 ~ 5608115 (+)
G140946 NA non-coding downstream 57827 5609873 ~ 5610178 (+)
G140858 NA non-coding downstream 67610 5619656 ~ 5681459 (+)
CI01000027_05071693_05072917 NA other upstream 468279 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 470547 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 485476 5050310 ~ 5055755 (+)
G140440 NA other upstream 755755 4780417 ~ 4785660 (+)
G140436 NA other upstream 762077 4737398 ~ 4774262 (+)
G140862 NA other downstream 160566 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 204936 5756982 ~ 5758881 (+)
G140924 NA other downstream 411160 5963206 ~ 5965326 (+)
G141052 NA other downstream 719321 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1154331 6705983 ~ 6708513 (+)

Expression


Co-expression Network