XLOC_008534 (aifm4)


Basic Information

Item Value
gene id XLOC_008534
gene name aifm4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25438714 ~ 25448626 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017060
ctgagagccgCCGTCGCTGCTGTGTCATGATGAGCTGGTTTCACAAAGAGTTATCCTCTCAATGGGCTGCAAAGAAACCGACTGACAGCAGTTTGAAAACCGGAGGATTTTATCTGGACAGATAGCCCAAGTGACAAGTTCAGTCCTATTTCTCCAATTTAGTATAAGCTTATAAACCAATGGAGGCAAAACAGTGTAAAGAGGTCACGGAGATGGTGTGTTTGGAGTCCGATCTGCAGGATGGACAAATGAAGGAGGTTCTGGTGGATGAGAATAAAATCCTGTTGGTGCGCAATAATGGAGAATTTACTGCTGTCGGTGGTCTTTGCTCTCATTATGGTGCTCCACTTATCAAAGGTACATTGATTGGAGACCGAGTTCGGTGCCCATTTCATGGAGCGTGTTTCAATACTAAAACTGGAGATATTGAAGAGTTTCCTGGCCTGGATTGTCTGCCTAAATTTAAAGTCAAGGTTGATGGTGGTAAAGTCTACGTGACCAGTGATCAAAAGAATCTGAAGAAGCGCGTTAAGAAAATGAGCAGTCGAGTGCCTGGAGTCAATCATACAGTTGTTTTGATCGGAGGAGGCCCAGCTTCATTGCAATGTGCAGAAACTCTCCGTCAGAATGATTATGGTGGGAGAATTGTAATGGTTACCAAAGATGAACAGCTGCCTCTGGATAAAACCAAGCTTAGCAAGGCAATGAATATTGAAATCGAAAAGGTGCTGCTACGACAAAGTGATTTCCTTCAACAATATGGAATAGAAGTGTGGACTAAAAAAGAGGTAAAATCTGTTGACACAGATGCTAAAACAGTGACTTTCCAGGATGGCACTTTGCAGAACTATGACCAGCTTTTGATTTCTACTGGTGGCAGagccAGACCACTGGAGTGTCCTGGTGCTGAGCTAGAAAACGTGAAACTGCTGCAGACCTATGAGGATGCCTCAGAAATCCATCGAATAAGTGCAGGCAAAAAGGCTGTCATTGTTGGAACTTCGTTTATAGGAATGGAGGTTGCAGCTTATCTCTCTGACAAGGCTGCCAGTGTCACTGTTATAGGAACCAGTAAGTTTCCTTTCCAGGCATCACTGGGATCAGACATTGGAAAAATGACGATGCAGATGCTGGAGGAGAAAAATGTGAAGTTCTACACAAGTAATGGTGTGGCTGAAATTCGAGGTGAAAATGGAAAGGTCAAGGAAGTTGTTCTAAAAAATGGTGAAGTCCTTCCAGCGGATATTATAATTGCGGGCATTGgtgTCATTCCCAACTCTGATTTTCTTAAGGAGACATTGGTGGAAATTGATTCACACAAAGCTGTTGTTGTTGACAAGTTCATGAAAACCAACATTCCTGATGTCTTTGCTGCTGGAGATGTGGTGTCTTTTCCACTTACTTTGGTCGGACATAAGAGAGTCAATATTGGACATTGGCAATTAGCACAAGCTCATGGACGAATCGCAGGCTTAAGCATGTTGAATCGACAGGTTGAAATAAACACTGTGCCTTACTTCTGGACCATGCTGTTGGGAAAAAGTATTCGGTATACAGgCTATGGAGAAGGATACACTGAGATTGTTTTCAAAGGAAGTACGGAGGAAAGAAAATTCTTGGCATTTTATATTAAGGATGAAGAAGTTGTTGCAGCTGCCAGCTTGAACTTTGACCCTGCTGTTGCAAGGTTGGCGGAAATGTTATTGATGGGGAAGAGGATCACTAAGGCGCAGGCACAATCTGATAACCTCAGCTGGTTGCAGCTCCCATGAAAGTGCTTTAACCACACTTACCTCCATGAATTTACTGATTACAGTTTGTTCATCTGTCAGTTTATTTGACTGTCATGCCTATTGCTTAATTATTGACTAAGTTTTGCTCTATCTTTCATACTTTTTTTGTGTTAATGTTTTCTCCCTGTATAGAGAAAACTCTTCTGGTGCAGCTATTTTCAGAAACAACTGAAGAACAGCTGCAAATCTTACTATGTCATCAGTTACTAAATAACAAGACTTTTgctacttaataaaataaataatgtacaatatacaTTTTCATTACTTTAGTAGGTTAATTATCTTTAATTTAGTTACAAAGTTTAGAGTAAAATGATGGTGtatgtttaattaaattgtttatctTGGTTCACAGAGCAttaaatttcacaaatatgggttatattttaaagaatttattatagaggtggcacggtggctcagtggttagcactgttgcctcacagcaagaaggtcactggtgcgag
>TCONS_00017061
ATCTGAGCTCAAGGTGTATTAATCTGTGATAGCTGTGACTTTACAAAGCGTCTTTTTTTAAGCTATCAATGAATGTATTAATCTTGCGTTTGTATTTTGGATAACCGCGTTTAAACATACAAATCTTGTTTTACAGATAGCCCAAGTGACAAGTTCAGTCCTATTTCTCCAATTTAGTATAAGCTTATAAACCAATGGAGGCAAAACAGTGTAAAGAGGTCACGGAGATGGTGTGTTTGGAGTCCGATCTGCAGGATGGACAAATGAAGGAGGTTCTGGTGGATGAGAATAAAATCCTGTTGGTGCGCAATAATGGAGAATTTACTGCTGTCGGTGGTCTTTGCTCTCATTATGGTGCTCCACTTATCAAAGGTACATTGATTGGAGACCGAGTTCGGTGCCCATTTCATGGAGCGTGTTTCAATACTAAAACTGGAGATATTGAAGAGTTTCCTGGCCTGGATTGTCTGCCTAAATTTAAAGTCAAGGTTGATGGTGGTAAAGTCTACGTGACCAGTGATCAAAAGAATCTGAAGAAGCGCGTTAAGAAAATGAGCAGTCGAGTGCCTGGAGTCAATCATACAGTTGTTTTGATCGGAGGAGGCCCAGCTTCATTGCAATGTGCAGAAACTCTCCGTCAGAATGATTATGGTGGGAGAATTGTAATGGTTACCAAAGATGAACAGCTGCCTCTGGATAAAACCAAGCTTAGCAAGGCAATGAATATTGAAATCGAAAAGGTGCTGCTACGACAAAGTGATTTCCTTCAACAATATGGAATAGAAGTGTGGACTAAAAAAGAG

Function

symbol description
aifm4 Predicted to enable several functions, including 2 iron, 2 sulfur cluster binding activity; flavin adenine dinucleotide binding activity; and metal ion binding activity.

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070112-2282 Predicted to enable several functions, including 2 iron, 2 sulfur cluster binding activity; flavin adenine dinucleotide binding activity; and metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000061634

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017060 False 2263 mRNA 0.41 20 25438714 25448626
TCONS_00017061 True 803 mRNA 0.41 8 25439106 25443025

Neighbor

gene id symbol gene type direction distance location
XLOC_008533 NA coding upstream 39140 25395901 ~ 25399574 (+)
XLOC_008532 NA coding upstream 61220 25370567 ~ 25377494 (+)
XLOC_008531 NA coding upstream 228872 25208392 ~ 25209842 (+)
XLOC_008530 slc35f2l coding upstream 269101 25156121 ~ 25169613 (+)
XLOC_008529 NA coding upstream 343416 25094836 ~ 25095298 (+)
XLOC_008535 pak4 coding downstream 3466 25452092 ~ 25486010 (+)
XLOC_008536 CU856359.1 coding downstream 21103 25469729 ~ 25469845 (+)
XLOC_008537 zgc:152863 coding downstream 40780 25489406 ~ 25499518 (+)
XLOC_008538 npat coding downstream 79664 25528290 ~ 25542592 (+)
XLOC_008539 NA coding downstream 120311 25568937 ~ 25570599 (+)
XLOC_008463 BX663520.1 misc upstream 4186432 21252191 ~ 21252282 (+)
XLOC_008528 BX908796.5 non-coding upstream 369359 25063306 ~ 25069355 (+)
XLOC_008541 CT027805.2 non-coding downstream 218961 25667587 ~ 25667701 (+)
XLOC_008543 NA non-coding downstream 447839 25896465 ~ 25902650 (+)
XLOC_008544 CR848822.1 non-coding downstream 657689 26106315 ~ 26106433 (+)

Expression


Co-expression Network