CI01000027_05711573_05714490


Basic Information

Item Value
gene id CI01000027_05711573_05714490
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5711477 ~ 5714573 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05711573_05714490.mRNA
CTTTAAAGAAGGAGAAGATGTTCCCCTCAGGAGGAAGGACACTGGTTTTAGAGGAAAGAATAGAGTGTCAGTTATGGAAAAAGTCATTTTAAAGAAATGAAGATCTTCAATCGAGAGAAAAAGGATCCAGTGGTAGAAGACAGTGATGAGAAAATCAATGCCAACAATGCTACTTTACCTGAGAGTGATTCATCTGACTCCTCATCGGGTGAAAAACAAAAACATTTAAATGAGGCACAGGAAGATGATTTGCAAGTACAGGAAGTTGAGGGGGACTGGGAGTGTGTTGAATGTGCTTGCAGTGCAGATGATAAAATCATTGGAGGTTATGAATGTTCGCCCAACTCCCAGCCCTGGCAAGTCTACCTTACTTATGATAATGGGCAACGCTGGTGTGGAGCATCTCTGATTAATGAAAGATGGGTTGTTTCTGCTGCTCATTGCTACGTTTCAGCTTCTCGTCTTACTGTCCACTTGGGAGAGCACAATGTGTACATTGAAGAAGGCACAGAGCAGAGGATCGGGGCAGAGAAAGTGATTCCTCACCCGAAATACAGTGATTTTACATATAACAATGATTTCATGCTGATCAAGCTGAAGGAGCCTGCCATCTTTAACCAGTATGTGCAGCCAATCTCTCTGGCGACCAGTTGCTCTTCTGCAGGGGAGCAGTGCTTGGTTTCTGGATGGGGCAATCAGATCACCACTGGAGTTGACTATGCTTCTGTGCTGCAGTCTTTTCCTAACTATTCTCAGGGTGATTCTGGCGGTCCTGTGGTGTGCAATGGGGAACTGCGAGGAGTTGTTTCCTGGGGTTATGGCTGTGCTCAGCCTGGCTATCCTGGGGTTTATGCTGAGGTTTGCCGCTACACTGACTGGGTCGAGTCCACCATAGCTAACAATTAGTTGTTTGTTCAGTCGAGTTGGTCCTTTTGATTACAAATTAAAATTTTTCTGAAATATCTGTGATTAAATTTAGCTTTGAACAA

Function

NR:

description
Zgc:171509 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05711573_05714490.mRNA False 989 mRNA 0.44 4 5711477 5714573

Neighbor

gene id symbol gene type direction distance location
CI01000027_05701396_05711410 NA coding upstream 17 5700876 ~ 5711460 (+)
CI01000027_05691123_05698421 NA coding upstream 12857 5691017 ~ 5698620 (+)
CI01000027_05684713_05689894 NA coding upstream 21561 5684595 ~ 5689916 (+)
CI01000027_05675953_05678901 NA coding upstream 32427 5675145 ~ 5679050 (+)
CI01000027_05668637_05672662 NA coding upstream 38413 5666375 ~ 5673064 (+)
CI01000027_05719979_05720814 NA coding downstream 5330 5719903 ~ 5721334 (+)
CI01000027_05724339_05733809 NA coding downstream 8861 5723434 ~ 5733859 (+)
CI01000027_05735304_05738483 ZNF576.2 coding downstream 20554 5735127 ~ 5738924 (+)
CI01000027_05740951_05748956 NA coding downstream 26378 5740951 ~ 5748956 (+)
CI01000027_05757143_05758496 NA coding downstream 42440 5756982 ~ 5758881 (+)
G140858 NA non-coding upstream 30018 5619656 ~ 5681459 (+)
G140946 NA non-coding upstream 101299 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 103362 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 143824 5566567 ~ 5567653 (+)
CI01000027_05563090_05579132 NA non-coding upstream 145007 5560351 ~ 5579146 (+)
G140894 NA non-coding downstream 35658 5750231 ~ 5753375 (+)
G140950 NA non-coding downstream 107237 5821810 ~ 5822331 (+)
G140869 NA non-coding downstream 192223 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 243716 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 299116 6013689 ~ 6017411 (+)
CI01000027_05071693_05072917 NA other upstream 638341 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 640609 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 655538 5050310 ~ 5055755 (+)
G140440 NA other upstream 925817 4780417 ~ 4785660 (+)
G140436 NA other upstream 932139 4737398 ~ 4774262 (+)
G140924 NA other downstream 248633 5963206 ~ 5965326 (+)
G141052 NA other downstream 556794 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 991804 6705983 ~ 6708513 (+)
G141082 NA other downstream 1183838 6898411 ~ 6900923 (+)

Expression


Co-expression Network