CI01000027_05719979_05720814


Basic Information

Item Value
gene id CI01000027_05719979_05720814
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5719903 ~ 5721334 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05719979_05720814.mRNA
GTATAAAACCCAAGACTATCTATAAGTCATATGTAGGTACTAGGCAATATTGCTGATAAAAGTTGCATTAGAGCCCATGAGTTCCTTGTCAAATAGAGCTCATCTTACTGTCCACCTGGGAGAACACAACATAACCATTGAAGAAGGCACAGAGCAGCGGATCGGGGCAGAGAAAGTGATTCCTCACCCGGAATATAATCATTTGACATATAACAATGATTTCATGCTGATCAAGCTGAAGGAGCCTGCCATTTTTAACAAATATGTACAGCCAATCCCTCTGGCGACCAGTTGCTCTTCTGCAGGGGAGCAGTGCTTGGTTTCTGGATGGGGAAATCAGAACACTACTGTAGTTGACTATGCTTCAGTGCTGCAGTGTTTGAATTTGCCTGTACTGTCAAGGTCGCAGTGTGAGGGTGCATATGGTAACAGAATGACTGAAAACATGTTCTGTGCTGGATTCATGGAGGGAGGCAAAGACTCATGTCAGGGTGATTCTGGCGGTCCTGTGGTGTGCAATGGGGAACTGCGAGGAGTTGTTTCCTGGGGTTATGACTGTGCTCAGCCTGGCTATCCTGGGGTTTATGTTGAGGTGTGCCGCTACACTGACTGGGCCAAAAACATCATAGATGACAACTAACTGTTTGTTTAGACTGCATGACTGACAGAATCATTTTCCTTTTTCCTGAAATATCTACAATTAAATTCATCTTTAAACATGCATAGGTGTCTCTGTGTTTAGTTTCTAAATGGACAGTCAGCATGAAACGGAAGTTATGATACTCTTTTCATTAAATGGTTTCTCGAACAAGAAAAAACGTAGGGCAGAACTTGATTTTGTCCATTGGGAATTTATTGAATATGAGGTCTCTGCAGAACAAAAGTGGGCATTTCTGTATTTGTGGGTGTTTTCAAACTGGTGAGTGTTTATATATCATGCAATGAAAATGATCCCTTTCACCCGACCCAACCTCTAAACCCTACCCACACTCTGACGTGGGCAAATCAGGTAACGCTCTCAAAAACACCCCTCTGTTTATGGCCTCGCCCACTGATAATTACTGTCCTGCAGAGACCTGTACTTGAATTTATTGGATCGTTGTGGTTTGCTATTGGTTGATGTCATGTGAGTGACAGGTTGTCCCCATGTGATCCCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05719979_05720814.mRNA False 1160 mRNA 0.43 3 5719903 5721334

Neighbor

gene id symbol gene type direction distance location
CI01000027_05711573_05714490 NA coding upstream 5330 5711477 ~ 5714573 (+)
CI01000027_05701396_05711410 NA coding upstream 8443 5700876 ~ 5711460 (+)
CI01000027_05691123_05698421 NA coding upstream 21283 5691017 ~ 5698620 (+)
CI01000027_05684713_05689894 NA coding upstream 29987 5684595 ~ 5689916 (+)
CI01000027_05675953_05678901 NA coding upstream 40853 5675145 ~ 5679050 (+)
CI01000027_05724339_05733809 NA coding downstream 2100 5723434 ~ 5733859 (+)
CI01000027_05735304_05738483 ZNF576.2 coding downstream 13793 5735127 ~ 5738924 (+)
CI01000027_05740951_05748956 NA coding downstream 19617 5740951 ~ 5748956 (+)
CI01000027_05757143_05758496 NA coding downstream 35679 5756982 ~ 5758881 (+)
CI01000027_05781043_05784234 KLHL38B coding downstream 59272 5780606 ~ 5784415 (+)
G140858 NA non-coding upstream 38444 5619656 ~ 5681459 (+)
G140946 NA non-coding upstream 109725 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 111788 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 152250 5566567 ~ 5567653 (+)
CI01000027_05563090_05579132 NA non-coding upstream 153433 5560351 ~ 5579146 (+)
G140894 NA non-coding downstream 28897 5750231 ~ 5753375 (+)
G140950 NA non-coding downstream 100476 5821810 ~ 5822331 (+)
G140869 NA non-coding downstream 185462 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 236955 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 292355 6013689 ~ 6017411 (+)
CI01000027_05071693_05072917 NA other upstream 646767 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 649035 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 663964 5050310 ~ 5055755 (+)
G140440 NA other upstream 934243 4780417 ~ 4785660 (+)
G140436 NA other upstream 940565 4737398 ~ 4774262 (+)
G140924 NA other downstream 241872 5963206 ~ 5965326 (+)
G141052 NA other downstream 550033 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 985043 6705983 ~ 6708513 (+)
G141082 NA other downstream 1177077 6898411 ~ 6900923 (+)

Expression


Co-expression Network