Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000027_05807381_05817636 |
| gene name | TBC1D31 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 5807029 ~ 5817665 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| tbc1d31 | Predicted to be active in centrosome. Orthologous to human TBC1D31 (TBC1 domain family member 31). |
| id | name | namespace |
|---|---|---|
| GO:0005813 | centrosome | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000027_05807381_05817636.mRNA | True | 3441 | mRNA | 0.46 | 21 | 5807029 | 5817665 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_05805062_05805690 | NA | coding | upstream | 1006 | 5805062 ~ 5806023 (+) |
| CI01000027_05789308_05795504 | FBXO32 | coding | upstream | 10970 | 5789156 ~ 5796059 (+) |
| CI01000027_05781043_05784234 | KLHL38B | coding | upstream | 22614 | 5780606 ~ 5784415 (+) |
| CI01000027_05757143_05758496 | NA | coding | upstream | 48148 | 5756982 ~ 5758881 (+) |
| CI01000027_05740951_05748956 | NA | coding | upstream | 58073 | 5740951 ~ 5748956 (+) |
| CI01000027_05820700_05833750 | DYNC1I1 | coding | downstream | 2802 | 5820467 ~ 5834241 (+) |
| CI01000027_05836494_05847115 | NA | coding | downstream | 18829 | 5836494 ~ 5847601 (+) |
| CI01000027_05882855_05906234 | JARID2A | coding | downstream | 65190 | 5882855 ~ 5906234 (+) |
| CI01000027_05931114_05936800 | MYLIPB | coding | downstream | 113449 | 5931114 ~ 5936957 (+) |
| CI01000027_05981521_05983935 | ZHX2, ZHX2A | coding | downstream | 163691 | 5981356 ~ 5984703 (+) |
| G140894 | NA | non-coding | upstream | 53654 | 5750231 ~ 5753375 (+) |
| G140858 | NA | non-coding | upstream | 125570 | 5619656 ~ 5681459 (+) |
| G140946 | NA | non-coding | upstream | 196851 | 5609873 ~ 5610178 (+) |
| G140920 | NA | non-coding | upstream | 198914 | 5602529 ~ 5608115 (+) |
| G140929 | NA | non-coding | upstream | 239376 | 5566567 ~ 5567653 (+) |
| G140950 | NA | non-coding | downstream | 4145 | 5821810 ~ 5822331 (+) |
| G140869 | NA | non-coding | downstream | 89131 | 5906796 ~ 5911149 (+) |
| G140893 | NA | non-coding | downstream | 140624 | 5958289 ~ 5959908 (+) |
| G140875 | NA | non-coding | downstream | 196024 | 6013689 ~ 6017411 (+) |
| G140889 | NA | non-coding | downstream | 348095 | 6165760 ~ 6170544 (+) |
| G140862 | NA | other | upstream | 86264 | 5712612 ~ 5712702 (+) |
| CI01000027_05071693_05072917 | NA | other | upstream | 733893 | 5071693 ~ 5073136 (+) |
| CI01000027_05069310_05070638 | NA | other | upstream | 736161 | 5067917 ~ 5070868 (+) |
| CI01000027_05050310_05055447 | NA | other | upstream | 751090 | 5050310 ~ 5055755 (+) |
| G140924 | NA | other | downstream | 145541 | 5963206 ~ 5965326 (+) |
| G141052 | NA | other | downstream | 453702 | 6271367 ~ 6271600 (+) |
| CI01000027_06706050_06708485 | NA | other | downstream | 888712 | 6705983 ~ 6708513 (+) |
| G141082 | NA | other | downstream | 1080746 | 6898411 ~ 6900923 (+) |
| CI01000027_06951132_06956691 | GLIPR2, GLIPR2L | other | downstream | 1135281 | 6951132 ~ 6957767 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_009935 | tbc1d31 | coding | NC_007127.7 | CM002900.2 | 25296389 ~ 25315136 (+) |
