XLOC_008537 (zgc:152863)


Basic Information

Item Value
gene id XLOC_008537
gene name zgc:152863
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25489406 ~ 25499518 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017064
GACAGCTGCTGCTCTCGAATAGATGCACTTGTTGAATCAGGTCCCATTGAGCAGAGGGGGACTCAGGTTGCTCGTATCATCTGAAAACATTTGACCGACATCTTCTAAATGAAGGCACACTAAAGAAGCGACCGGGCTACGACGATTTAGAACCTCCCAGCGAGACGCATTTTCAGgacAGGAGTTTTGATGTCTGCTCGGCGATCATCTCTCTGGTCATGTCTGCGTGCTGCTCTGAGCTGCGGGCTTGTCATGCTGACAGCACTGCCAGACTTAACCACAGGCAAGAATTGCTCCCATCCAATCATGCATGAGCATGGAGGTTTTCGTTGTGAGCCGTCACCCTGTCGTGGTTTCCCTCAAAAGAGCTCCATTCGCTTCTTCTGCGAGCCTGGCTACACTTTACCCAAACGCTACCAATCGTCAAAATGTCACCATGGGGTGTGGACACCGAAAGTGCCTGTCTGTATGCCACGACCAGACGGTCATGGTGAACAGCAAGAAAAAATCATCAGCTCTATTCCGAGTGTGGCTACGACTGCTATTGGAGTGTCCATCTTCCTTCTCACCACAACGGCCTGTTTAGTCATCAAATCCCGCCTGTTCTCCTGCCGATCGCATCGGCGTTCCTCGGATCAGCTGGATCTAGTGGTGGATGGTTTACCCGTATCTCTTCCCACATACGAAGAGGCTATCTATGGCAGTTGGGGCCAGCGAATCCCGCCATTTCGTGGTCCCACTCAGCTCCTATTAGCCCAGGACGCTTCAGAACACAGTCCACTAACATCACTGATTCGCTCTGATACAAATCGTTGCAACGACACCGCCAATCAGACCACAGAGACTCCACCTCCTTACGAAGAGGTCCAATCACGATCCAGAGACTCTGTGAATGACAGTGACGGACAGGCCATGCAAAGTGCACTTCCTGCTGATAAAAACAACTAATTATTGGACTTCAGTGAACTCACCCTTAGcctttttgattgtttgtttccTTGCACAGGAGTCCGACTGCGACTTTTTTTTCCGTCTTTGATTATGGATCTCTTTTGGCTTACAACACCAGTGGAAAAACTGCCGCAAATGTTTTGTAATGACCCTAATGGTCAAATCTATTTTGTTTATAGGTGACGTGCTGCAATATTGATTATGTCGTTGTTTTCACGAACAAGGTGGAGACGTGGCTATACCATTTGTCCTCTGTGAGGGGAAATCTAGTGTTTATGAGCACTTTTATGAGTGATGAGtgacttttatttaataatttctgaGAGTTTTAGTGTGGAGCGAATATGATTTCATTGCCTGAAATGtaaaaatcagtgtttctcagAGCATTCGGGTTGATTGAATGTTACTGCTGAACTTTGAAGATTGTGCCTGTTGACTGATGGATTGTAGTATATGATTTTATTCTGTGTCTTTCTGCCTGAAATGAtttcttaaatattgtttaatatatatatatatgatttcagAAAAGACTTGAAGTATGCTTGCTAAACAGACAttgaatgtgtttttgtgtaaCATTTACAATATCTTGTATATAGTTCTGCACAAATAGTATGTTAAataattatacttttttaaactttatgaACAATGTttgctattaaaaatattttaaatc

Function

symbol description
zgc:152863 Orthologous to human SUSD6 (sushi domain containing 6).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061103-463 Orthologous to human SUSD6 (sushi domain containing 6).

Ensembl:

ensembl_id ENSDARG00000099969

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017064 True 1636 mRNA 0.43 5 25489406 25499518

Neighbor

gene id symbol gene type direction distance location
XLOC_008535 pak4 coding upstream 3396 25452092 ~ 25486010 (+)
XLOC_008536 CU856359.1 coding upstream 19561 25469729 ~ 25469845 (+)
XLOC_008534 aifm4 coding upstream 40780 25438714 ~ 25448626 (+)
XLOC_008533 NA coding upstream 89832 25395901 ~ 25399574 (+)
XLOC_008532 NA coding upstream 111912 25370567 ~ 25377494 (+)
XLOC_008538 npat coding downstream 28772 25528290 ~ 25542592 (+)
XLOC_008539 NA coding downstream 69419 25568937 ~ 25570599 (+)
XLOC_008540 tsr1 coding downstream 135808 25635326 ~ 25656331 (+)
XLOC_008541 CT027805.2 coding downstream 168069 25667587 ~ 25667701 (+)
XLOC_008542 hic1 coding downstream 181526 25681044 ~ 25690267 (+)
XLOC_008463 BX663520.1 misc upstream 4237124 21252191 ~ 21252282 (+)
XLOC_008531 NA non-coding upstream 279564 25208392 ~ 25209842 (+)
XLOC_008529 NA non-coding upstream 394108 25094836 ~ 25095298 (+)
XLOC_008543 NA non-coding downstream 396947 25896465 ~ 25902650 (+)
XLOC_008544 CR848822.1 non-coding downstream 606797 26106315 ~ 26106433 (+)
XLOC_008546 CABZ01021926.1 non-coding downstream 940595 26440113 ~ 26440227 (+)

Expression


Co-expression Network