CI01000027_06327905_06328111


Basic Information

Item Value
gene id CI01000027_06327905_06328111
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6327905 ~ 6328220 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_06327905_06328111.mRNA
ATGGTTGTCAACAACACAAAGCCTAATAACCGTGAGCATGCTAACGGGCTCTCTGCTGGTCTTTTGATAGTATTGCAATCCTACATATCAGGGGTTTTAAAACTTGTAATGCTTAGGACCTCCAAATATGACGATGATCTCCTAGCTATGATGTGTCAAAACAATGGCAAGCTTAATATAGGCATAAGGACAAATGGAGTGATTTAACAGACTAAAATAAACAAATTAATATATAATGAAATTATTACATTTTCGTTTTTCATTTCAAGGCGTATATGTCGTAGGCCTATTTCAGGCCACTTTTCATGTTACATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_06327905_06328111.mRNA True 316 mRNA 0.35 1 6327905 6328220

Neighbor

gene id symbol gene type direction distance location
CI01000027_06108585_06112721 NA coding upstream 215150 6108585 ~ 6112755 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding upstream 219910 6103889 ~ 6107995 (+)
CI01000027_06042239_06051165 CBLC coding upstream 276286 6040913 ~ 6051619 (+)
CI01000027_05994575_05998236 NSMCE2 coding upstream 329552 5994575 ~ 5998353 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding upstream 343202 5981356 ~ 5984703 (+)
CI01000027_06329025_06333271 NA coding downstream 499 6328719 ~ 6333336 (+)
CI01000027_06335278_06348176 NA coding downstream 6940 6335160 ~ 6348853 (+)
CI01000027_06392269_06407773 PTPN3 coding downstream 63538 6391758 ~ 6407840 (+)
CI01000027_06410011_06426230 EPB41L4B coding downstream 81791 6410011 ~ 6426936 (+)
CI01000027_06458587_06470747 KIAA1429 coding downstream 130367 6458587 ~ 6470747 (+)
G141038 NA non-coding upstream 2561 6322828 ~ 6325344 (+)
G141032 NA non-coding upstream 25121 6301000 ~ 6302784 (+)
G141044 NA non-coding upstream 27322 6300314 ~ 6300583 (+)
G141037 NA non-coding upstream 28147 6299330 ~ 6299758 (+)
G141060 NA non-coding upstream 29327 6298353 ~ 6298578 (+)
G141117 NA non-coding downstream 22879 6351099 ~ 6354786 (+)
G141093 NA non-coding downstream 80329 6408549 ~ 6408804 (+)
G141080 NA non-coding downstream 80718 6408938 ~ 6409292 (+)
G141114 NA non-coding downstream 109705 6437925 ~ 6440544 (+)
G141113 NA non-coding downstream 116074 6444294 ~ 6445548 (+)
G141052 NA other upstream 56305 6271367 ~ 6271600 (+)
G140924 NA other upstream 362579 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 569035 5756982 ~ 5758881 (+)
G140862 NA other upstream 607140 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 1254769 5071693 ~ 5073136 (+)
CI01000027_06706050_06708485 NA other downstream 378157 6705983 ~ 6708513 (+)
G141082 NA other downstream 570191 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 624726 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1140524 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1622483 7947657 ~ 7951942 (+)

Expression


Co-expression Network