CI01000027_06470650_06470837


Basic Information

Item Value
gene id CI01000027_06470650_06470837
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6470650 ~ 6470988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_06470650_06470837.mRNA
GTGCTTACCGATTGGCTCCTCGAGACAGAGCCACCAGAGGCAGAGGGACAGGCCTGTCCTGGCTGAGTGGTGGTGGAGTTGGTGTGGGAGGAGGTGGAGTAAGTGGCGGTGGACGTGGTCAAGGGAAGTTCAGCAGCGGAGGAAGTGGAGGCGGACGGGGCCGACACGTCCGTTCATTCACTCGCTAAACTCTGCCTTGAGCAAAGCAGACTCAGCCGTCAGGCTCTAAAGGACCAATCAGGATGTGGATCTGCTGTATCTGTTGCAACCATCGACTGATATTGTGTATATCATTGTCATGTTTTGTGTTTCTCTCATTTTTAAAACTGTTAAATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_06470650_06470837.mRNA True 339 mRNA 0.52 1 6470650 6470988

Neighbor

gene id symbol gene type direction distance location
CI01000027_06410011_06426230 EPB41L4B coding upstream 43714 6410011 ~ 6426936 (+)
CI01000027_06392269_06407773 PTPN3 coding upstream 62810 6391758 ~ 6407840 (+)
CI01000027_06335278_06348176 NA coding upstream 121797 6335160 ~ 6348853 (+)
CI01000027_06329025_06333271 NA coding upstream 137314 6328719 ~ 6333336 (+)
CI01000027_06327905_06328111 NA coding upstream 142430 6327905 ~ 6328220 (+)
CI01000027_06477695_06489968 RAD54B coding downstream 6707 6477695 ~ 6490033 (+)
CI01000027_06495825_06497691 GEM coding downstream 24363 6495351 ~ 6498078 (+)
CI01000027_06504915_06514535 NA coding downstream 33323 6504311 ~ 6515150 (+)
CI01000027_06604099_06652019 GALNT1 coding downstream 133111 6604099 ~ 6652188 (+)
CI01000027_06706050_06708485 NA coding downstream 234995 6705983 ~ 6708513 (+)
G141097 NA non-coding upstream 14284 6453119 ~ 6456366 (+)
G141112 NA non-coding upstream 19121 6451137 ~ 6451529 (+)
G141108 NA non-coding upstream 23792 6446582 ~ 6446858 (+)
G141113 NA non-coding upstream 25102 6444294 ~ 6445548 (+)
G141114 NA non-coding upstream 30106 6437925 ~ 6440544 (+)
G141138 NA non-coding downstream 22166 6493154 ~ 6493400 (+)
G141145 NA non-coding downstream 59604 6530592 ~ 6530818 (+)
G141146 NA non-coding downstream 63096 6534084 ~ 6534323 (+)
G141147 NA non-coding downstream 65389 6536377 ~ 6536592 (+)
G141052 NA other upstream 199050 6271367 ~ 6271600 (+)
G140924 NA other upstream 505324 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 711780 5756982 ~ 5758881 (+)
G140862 NA other upstream 749885 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 1397514 5071693 ~ 5073136 (+)
G141082 NA other downstream 427423 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 481958 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 997756 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1479715 7947657 ~ 7951942 (+)

Expression


Co-expression Network