CI01000027_06811768_06817052


Basic Information

Item Value
gene id CI01000027_06811768_06817052
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6811094 ~ 6817163 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_06811768_06817052.mRNA
CTTTTAAAACAGAATTAGTTCTGCATAGTCGGGCACATTTTTTCCATAGCGAAACCAAAGCGAAACCACTGGTTACAAAAACAAATGTGAGCATGGGCCATGATAGAGATGATAATCAAAACCAAACAGATGTTTTGTTAGTTTTTGGTATCTGATGCATGAGTTGTACAGGCTCCGCCCTCTTCTGGAATGCGTGGTGGGGAGCAGCAGCTCATTTGCATTTAAAGATACATGCATGAAAACAGTAGTGGTATAATATATGATATAATAAATGGTCTGTGGTATTTTGAACTGAAACTTCACAGACACATTCTGGGGACACCTGAGACTTTTATTACATCTTGTAAAAAGAGGCATAATAGGTCCCCTTTAATATGCCTGAGTTAACATGAACCAACAATGAACAGTTGCATTTTATTAACTAACGTTAACAAAGATGAATAAATATTGTAACAAATGTATTTTTCATTGTTCGTTAATGCATTAACGAATGTTAAGTAATTGGACCTTATTGTAAAGTATTACCATAATGTTTAATAAAATGTTTAAAATGTAATAATATTCAATTTTATATATAATAATATAATATATGACTCTCTTTTAGAGCAAGACAGAGTATGAATGGATGTGTTAAGCCTGTGACCTTATAAGAGAGGTCATAAGAGACAGTCATGATGGCGGAGGAGGCTGGTAAGCTTCCACTCCGGCGCCTGGAGCCCCCCATTCTGAAATTCATTAAAGTGGCCATCCCCACTGACCTGGAGAGACTGCACCAGCACCAACACAACATAGAAAAGAGAAGCAGACAGTGGGATAAACTGCACCAAGAGCACATCAACTCCAGCCGCACTGTCCAGCAGTTGAGATCTAACCTGCGGGAGATGGAGAAATTGTGTGGGCGGGTCCGCAGCGCTGATGTCGAAGATCTGGAGAAACTTGTTCAGCCAATCAGAGATCGAGCCTCCACTGCCATTCAAGAGTTCCTACAGATTCATTCGGATGCTATCAATAGGCCTTGCCTTCACGAAACTATCGGCACTGCCTCGGATAAATTGCACAGTGATGGTGATACAGGTGTCCCCGGTTCCCCTGTCACTCAAACACAGCTGCTCCTGCCTGAAATCCCTCCAGAACAGAACGCCGCTGAGTCCTGGGACACTTTAGCTGAGGACCTACTGGAATTGAATGGTTTAGTACAAGAGTTCTCCACTATTGTTCATGTTTGGCAGAGCTGTCAGGCAAATGGCTTTGTCTCCTGAGAGCCAACAAGGTGGTATTGATCCCATCAGTCTGTGTGTGTGTGTGTGTGTGATTGAGAAGACATACAGAGATTGGTGACAGTCTGTCAGCCATTAACTAACCAGTGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_06811768_06817052.mRNA True 1370 mRNA 0.42 6 6811094 6817163

Neighbor

gene id symbol gene type direction distance location
CI01000027_06785671_06803146 NR4A3 coding upstream 7881 6785671 ~ 6803213 (+)
CI01000027_06706050_06708485 NA coding upstream 102581 6705983 ~ 6708513 (+)
CI01000027_06604099_06652019 GALNT1 coding upstream 158906 6604099 ~ 6652188 (+)
CI01000027_06504915_06514535 NA coding upstream 295944 6504311 ~ 6515150 (+)
CI01000027_06495825_06497691 GEM coding upstream 313016 6495351 ~ 6498078 (+)
CI01000027_06859191_06877582 NA coding downstream 42028 6859191 ~ 6877625 (+)
CI01000027_06906104_06909909 NA coding downstream 88941 6906104 ~ 6910164 (+)
CI01000027_06915303_06927001 TMEM67 coding downstream 98140 6915303 ~ 6927308 (+)
CI01000027_06947553_06950983 NA coding downstream 129098 6946261 ~ 6950983 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L coding downstream 133969 6951132 ~ 6957767 (+)
G141198 NA non-coding upstream 30612 6779685 ~ 6780482 (+)
G141197 NA non-coding upstream 32598 6778215 ~ 6778496 (+)
G141187 NA non-coding upstream 46538 6764348 ~ 6764556 (+)
G141183 NA non-coding upstream 55231 6755577 ~ 6755863 (+)
G141182 NA non-coding upstream 56986 6753896 ~ 6754108 (+)
G141209 NA non-coding downstream 53818 6870981 ~ 6871218 (+)
G141211 NA non-coding downstream 61842 6879005 ~ 6879349 (+)
G141089 NA non-coding downstream 95333 6912496 ~ 6915184 (+)
G141220 NA non-coding downstream 154953 6972116 ~ 6972331 (+)
G141221 NA non-coding downstream 156097 6973260 ~ 6973484 (+)
G141052 NA other upstream 539494 6271367 ~ 6271600 (+)
G140924 NA other upstream 845768 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 1052224 5756982 ~ 5758881 (+)
G140862 NA other upstream 1090329 5712612 ~ 5712702 (+)
G141082 NA other downstream 81248 6898411 ~ 6900923 (+)
CI01000027_07469157_07471720 NA other downstream 651581 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1133540 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 1209234 8025788 ~ 8032041 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location