CI01000027_07142789_07157141


Basic Information

Item Value
gene id CI01000027_07142789_07157141
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7142315 ~ 7157987 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07142789_07157141.mRNA
GTTTATAATCAACGTTAAGTAGAAACTCCAGTCTCCATATCTCAGCTGAGGATTACATAGTTCCTTTGCTCGTGGCTGTCAGGAAAAGGTTTGCGGAAGACACATTGTTTCAGCTGGTAGTCTGTAATCTTTAGTTTGAATTCCAGATTGCTAGATAGGTGCTTCTCATGCGTAGGGTTTTATCATATTTCCAGGAATTTTATTAAATGTCCTTCTGAGCAAAATGCTCTCGCCAGGCACAAAACTGTCCATAGAGATGGTTCGTGTGGAGAGAAGGGAGAAAGAGAGGGAGTTTTTCATTTCCTTTTCAAGTAAATGCCTGAGGCTTATCACTGCCTCTCTGCACCAACTGCAGTTGGCCACAGAATAAGCGGTGATGAGATTAGGCTGAGTGTGATTGGCGCAGACTCCCAGCAGAGAGTGCTTGTGCTGAAGGTGGCGTAATATAGGTGGCAGGTTTTTCATCCGGCAGCCATGGATTTGGAGACACGAGAACGTGCTGAATTGATGCCACACAGTAGAGCAGAGGAGGAGAAGGAGGAGGATAGTGTTAGCAAACTGACCCCGCTCAATGACAAAGACAAAGTAAAGAAGTTGTTTCGTGGGCTGCAGGAAGATCCAAAGAAGGGGACTGCCTGTTCCACAGTGCAGTGCACTATATGGAATGAGTGGGAGAACGAGAAAGCAAGGCTGAAAGAGTTGAAGCAGAGAGAATTTGCACGTAATGTCTCCTCCAAGTCCTGGAAAGATGAGAAAAAGCAGAAAAGAGCTCTGAAACGACTGCACCAGCTTGCACAACTCAAACAGCAAAGAGACAGTGATGACAGGAAAGGTCCAAAGTTAAGGTCTACAAACAAGAATAAGGATCCAGTTCAAATCCTTTCTGCTGGCAATAGCAAGTTTGACACAAAACCAACAGCATCCTTGGTTCAAAACTTAACTACTATCTCCACAAACACCTCATTGAAGGGCTTGTCCTCCACTCGTGTGCCCACACATCAGCAGCCATGCCACGAAAAACACCCCTTACCAACAAAATCCTCTGCAGGACACCGGAGCCCCAGAGCAGGTGTCTCATTCTGTTTCTCCAGACGAGCTCAACTAAAGCTGGACTCCTGTGCATCTGTGTTCAGTGATGGGCTTGAGGAGGCCAGTGACTATCAAGAGCTCCAGCGCAACAAGCACAGACTCGCCCTGGAGGCCCTTTGGTCTTGCTCGAGCTCACCCAGAACCCCAAATAATGATGACCCTGATCTGTCCCATGATCCACCGACTCTGGGCTGGGTGGATGGAGACTCTCAAACACCTCAAATGGAAGCACAAGCAAAACATGTGGAGAGCCCTGAAATTCAGGCAAACTACAGCACAAGTCAGCCAGAGAAGCTAGGGTGTCCTGACACACACAGTCCTGGAGCAGACTGGAAGCCAGCTGGTTCAGAGGACAGATTGCTTAATGGGGGGCAGAGGCCCAGGGCAGAGGGGGCTTATGGGGGATCAGAGGAGAGAGAATGCCTCAAGTGCCCCGGCCCTACTGTTTACACAGATGGACAGGGTACCATGGCCCAAGGCCAACTTCAAATACACAAAGGCTCACACCACCATACACAGAAAAGCAGCGAACAGGGTATTATGCAGAATGGGAAGGACTGTATATCTGAAAAAGAGACAGAGGAGTATAAAATACACAGAGTGTACAAGAATGAACATACAGGTTCTTTCCTTAACGTAGTCAGCAAGGATGGAAGTATGACAAAATGGCCTTTTGAGCTGGTGCAGTACACTTCCGACGAGCCACGCGTATCTTACAGCTGTAACCCTCTCTACTATCATTTAAAACACAAGGAGGGCAAAGATAAAAGCACAAAGGCTGATGGGACAAATCTTGGTGTTGTTGACAAGCTCGCAGGCCAGAATGACAGAGCTAGACCACAAACACAGGATGTTCCAGGAGATAAATTAGGCATTTTAAAACCAAAGAAACCCAAACACAGGAGAAAGGGAAAAAAACATAGGCATAAATTAGATGCTGTCAAGATCCGGCAGGCAGGATGCGCATTCAAAACATGCTCGCAGACAGAAGCTGGAGGACACTTTGAATTCCAATGCACTCCAACCGACATGTCACTAAACAAGCAAGCGTGCACTGAGAGGAGGCACAAGCTGGGGAAGAGGAAAAGATCAGTGAGAGATGAGACTTCAAATGAAAGTGACACCCCAGAGCACAGCCTCAAAAGCATTGTTGTAAGCTCGCTTTCCGCCCCGGCACGTAAAAGGAAGAAATGTCAAACGATGAGGGGGCTTGTGTCAGCGCTGCGCTTGGTAAGGCGGAGGCCTTTGCCATATTCTGTTCACAACACAAAAGGAAGAGAGGATAATTATCGCTGGTATGACAACACCTATGAGTCAAAGAGGGATGCTGTCTCAACTCCCACCAGTGACAAATCTGGGTCGTGGAGTGGCCTGTCAGACTTGACCTCAGATGGAGAATGGCCTGTGTATCACATGGGGAGATGCTCCACCTCACCAAGATCAAACTATATATTGAGAAAGGAGCACAGTCAGCCCAGGTCTTGCATTAGAAGTAACTCTCACAATGTTCCTCACTACAGTTATAGTCCATGCAGAGATTTTGAACATACAGGAGACAATTGGGATTACACAGACTCTTACATCTACAATAAACGGAAATATTCAACAGATTATAACAGCCCAGAGCAGCATGAGAGACACAGCATCAGAAGGCACAAAAAAATTGTTGAGGAGCATAAACATAGAGAGCACAGAATTCAACATACAGGCAGGCAGTTATTTTATAGAGTCTATGACAGTCCTGAACCTCAAGAGGATGTCAGGGATTGGTGGTACGAAAGACTTAGCCCTGTAGGTAGGAGATACCGGGAGAGGGAAGAATTTCCTTGGTCAAGTCCAGAAAGAAGTGAAGACAGGTGGTATAACAAGCCAGTGTCCATTCGTAGCCCCAGTTCCTCTAGTAGCATTAGCATCTCTGATCTTAGTGGGGACTGGTTGTCTAATTCCCATATTAGGCCATCTCCAACTGGACAGAGCCAGAAACATTGCAGTCATTCCGGGTGGCCATCCGAGAGATTGGTCAAGACCAAATCATCCCATTCTCCTCTTAGAAAGAGGAGTCACTCACCCCCATTAGCTACAAGTAACCATGCAGCTCAGCCTAATTCCTTACAATCATGTGTAGGGAAGGAAGATGTTACACACAAATCTAACCCAGTGGCATCTGACCAGTTGGTTGAGAAGGATCCTAAAGTAAAGAAAGCAAATGTCACTCTCTCACTTCCGCTAATTGGCAAATTACCCTCTATTAAGAAAGGGGCAAGAAAAATAGGGAAAAATAAAGATGCAAGTGCCAGTATTAGTAACCAGGTTCAAACATCTTCAACTGTCCCATCAAATCAACAAGTTATACCTCAAATTGACAGCAAGACTCTAGAACACTTACAACACACAGATGGGCAAAATCCCAGCGCATCCCATGCTTGTCTTGAAATTGCCAAGGAGAATAGATCAACAGAAACCGGTTCTCCTTTAGCTCTGGATCCAGACAATACTTTGTCACAAAAACTTAACTTCAGAGACCAAGCGGACAATGCAGAAATTGCAGGGATTCACTGTCCAAAATGCACCACCCCTCCCCTTTCTGAGCAACCAATCACCTTCACTGATGATGAGATTGAGAAGTACAAATTGCTTCAACTCCAGGCCCAGCAGCATATGCAGCAGCAGCAGCATCTTCAAGAGCAAGTATCTGTGGACATGACCCATTTATCAGTACCATCTCCAGAGCCGCCTGATCAGACTACACTTTCAGCCTGTCTACCATACAACATACTCCAGCCCTCTTCTCCACCCTCTTCTATTGCTCCTCACTCTTCGCCTGTTGCCCTGTTACCGCCCCTTCATCCCTCCCTCTCTCAACCCCAATTTGCCCCTGCAATTCCTGCTGCCTTCTTTCCAGTGCCGCCTGCTACTGTGTTGGCAGCTCAACCCCTCCACCTGATCCCAGCCTCATCCTTCCACCCAGTTCACCCTCACCATCATGTTTCTGGGTTGACTCTCCACCCCCTGCCTCCCACTTCTCTGCTCCCCGCGATGCTCACCAGGACCTTCAGCGCCACCCTGGACCAACCAGCTAGCTCTGGTCAGAATGAGAGGGGAAAGGAGAATAAGAAAGAATATAGTTCTGACATGACCCCTCCAATTGTTCTGTGAACTTTCTGATGTTTAGGTTCTCCTCTCAGCCAAAGTTCCTGTTGAGTAGTGATTTATTTTTGTTTAATCTCTGTGTGTTGCAGTGTCAACTCAATGATGGCAAGATTTTTTACTTTGTTGTTTACCATTCCCTTCTTATACATCCATCGTCTCCCCGCATTAACACACAGATGAACCTCTCCTGCCTCACCACACTGTGATTTATTAGCAGTTGAGCCCATTCAGCATTTGGCTGAAATTAAGCATAACCTGAAGTCAAATTAGAATGTTAATGCCTTTTTCAATTAGTAATACATATAATTAGCATATTTTTATAGTTATGCTACCCAGCAAGTATTCAAAGGGTTTTATTTATGAAGAACTAGGGGAAATATCCTTGAGCAAACTTAAACTGACTAAGCAAAATGTACATGAAACTTAAGAATGATTCAGAAAAAAAATTTTGTTTCATTAAAATGTTTTTTTTTTCAATATGCAAATTGACATTGGTGCAGAAACACAGCATGTGATTGAGCTTTTGCATCTCTTAATGGATTTAGCAGTGTTCACCACTTTAGGTGAAGACATCCTGTTTTAATTTTTTTCTGTGTTAGTAGGGTAGAGTGAGTTTGGACTTGCTCAGCTGTAGTGTGGACATGCAATAATGTTTTTTTGTTTTTTGTTTTTCTCGATCTATTTAAAGTGTAAAATCTTGAATTGTATTTATGTATTCATACTTTGTAATGTAAGTAATAACAAATAACATGCACTTGATTGTTCATACATGTTTAAGATGCTTTTTATTCACTCTTATTTTGGTAGAGCCAAACATACTTTCATCTGTAAGATAATGTCATGGGAATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07142789_07157141.mRNA True 5091 mRNA 0.45 5 7142315 7157987

Neighbor

gene id symbol gene type direction distance location
CI01000027_07055665_07057014 NA coding upstream 85061 7055117 ~ 7057254 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L coding upstream 185473 6951132 ~ 6957767 (+)
CI01000027_06947553_06950983 NA coding upstream 191332 6946261 ~ 6950983 (+)
CI01000027_06915303_06927001 TMEM67 coding upstream 215007 6915303 ~ 6927308 (+)
CI01000027_06906104_06909909 NA coding upstream 232151 6906104 ~ 6910164 (+)
CI01000027_07216718_07225808 NA coding downstream 57781 7215768 ~ 7226571 (+)
CI01000027_07292677_07331000 FAM188A coding downstream 134690 7292677 ~ 7331032 (+)
CI01000027_07375781_07378401 ITGA8 coding downstream 217794 7375781 ~ 7378421 (+)
CI01000027_07432479_07451012 FAM171A1 coding downstream 274492 7432479 ~ 7452012 (+)
CI01000027_07455850_07459062 NMT2, NMT1 coding downstream 297863 7455850 ~ 7459062 (+)
G141096 NA non-coding upstream 161844 6978723 ~ 6980471 (+)
G141221 NA non-coding upstream 168831 6973260 ~ 6973484 (+)
G141220 NA non-coding upstream 169984 6972116 ~ 6972331 (+)
G141089 NA non-coding upstream 227131 6912496 ~ 6915184 (+)
G141211 NA non-coding upstream 262966 6879005 ~ 6879349 (+)
G141110 NA non-coding downstream 29542 7187529 ~ 7191167 (+)
G141254 NA non-coding downstream 35438 7193425 ~ 7193627 (+)
G141255 NA non-coding downstream 37288 7195275 ~ 7195494 (+)
G141321 NA non-coding downstream 147697 7305684 ~ 7329095 (+)
G141354 NA non-coding downstream 175435 7333422 ~ 7333632 (+)
G141082 NA other upstream 241392 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 431683 6705983 ~ 6708513 (+)
G141052 NA other upstream 870715 6271367 ~ 6271600 (+)
G140924 NA other upstream 1176989 5963206 ~ 5965326 (+)
CI01000027_07469157_07471720 NA other downstream 310757 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 792716 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 868410 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 1100350 8255073 ~ 8264897 (+)
G143033 NA other downstream 2570828 9728815 ~ 9729551 (+)

Expression


Co-expression Network