CI01000027_07469157_07471720


Basic Information

Item Value
gene id CI01000027_07469157_07471720
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7468964 ~ 7471999 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07469157_07471720.mRNA
ATTTATATGCCTGATTTCAGTGATTTATTCATGCATTACTGCATTAAATCCAGATTGAATCCTGCATTAGTCACTGCGTCAAGTGCACGTCTCTAGGGGGACTGTTTATAATATGATATGACTGGGCATGCTGCCACTGAGCCTTTCTGACTATTGATCTGATTTGATTCGCAGTTGAATCATTCGGGTAATAATGGATAATCAGGTGTTCGAGTCCACTGCAGAGCGGACGTTTCAGTATCAGAGCAGCCTCCCTCCTCTACCCGTGCCCGATCTACAGAACACACTGAACAAATACCTGCATTCAGTGAAACCTTTTGCATCTGAGGAGGAGTTTGGAGCCACAGAGGCCATTGTGAAACGCTTTGAGAAGGGTATTGGACAACAGCTGCACCAGAAGCTTCTACAGAGAGCCAAGAGCAGGCGCAACTGGCTTGAGGACTGGTGGCTAGACACAGCATATCTAGAGGTGCGCATCCCCTCTCAGCTGAATGTGAATTTTGGGGGACCTACAGCCTACCTGGAGCACTGCTGGCCTCCACGTGAGGGCACACAGCTGGAGAGGTCCAGCATAAATTTGTGGCACAGCCTCCAGTACTGGGACCTTATCCGCACGGAGAGGCTGGCTGTTCATAAAGCAGGAACAACACCCTTTGACATGGATCAGTTCCGCATGCTCTTCTGCACCTGCAAAGTGCCTGGCATCACTAAAGACAACATCCTCAACTTCTTTAAAACAGAGAGCGAAGGACCCTGCCCTTCTCACATGATAGTGATGTGTCGTGGGAGGGTATTCACATTTGATGCTCTTTGTGATGGTCGTATCCTCACTCCCCCAGAGCTGCTGAGGTATTGATTCAGTGTTTTTGTTTATCCTGTGTAATCTGTCTTAATATATGTCTTCAAACATTTTTTACATTTTAATGAGTAAATAATACAATAGGCAGTATTCTACGAAAAATGTTTCACATAGTAGTACACTATGTCATTGTCACATGACCTCGTCATGTTACATTTTCAATTCTGCTAGTGGTGTCCATTTAACGTTTTGGAAATTAAAATGGTGAATTTTGCATTTTCAACCAAATTTGCATTAAGATTATAACATGTGGCAGTCTGATAAAATAATGAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07469157_07471720.mRNA False 1135 mRNA 0.44 5 7468964 7471999

Neighbor

gene id symbol gene type direction distance location
CI01000027_07455850_07459062 NMT2, NMT1 coding upstream 9902 7455850 ~ 7459062 (+)
CI01000027_07432479_07451012 FAM171A1 coding upstream 16952 7432479 ~ 7452012 (+)
CI01000027_07375781_07378401 ITGA8 coding upstream 90543 7375781 ~ 7378421 (+)
CI01000027_07292677_07331000 FAM188A coding upstream 137932 7292677 ~ 7331032 (+)
CI01000027_07216718_07225808 NA coding upstream 242393 7215768 ~ 7226571 (+)
CI01000027_07529488_07537870 DCST2 coding downstream 57489 7529488 ~ 7539111 (+)
CI01000027_07541256_07541975 NA coding downstream 69257 7541256 ~ 7542152 (+)
CI01000027_07545610_07559939 NA coding downstream 73611 7545610 ~ 7560158 (+)
CI01000027_07561011_07562818 NA coding downstream 88892 7560891 ~ 7563845 (+)
CI01000027_07605090_07608785 NA coding downstream 132861 7604860 ~ 7609540 (+)
G141355 NA non-coding upstream 134827 7333909 ~ 7334137 (+)
G141354 NA non-coding upstream 135332 7333422 ~ 7333632 (+)
G141321 NA non-coding upstream 139869 7305684 ~ 7329095 (+)
G141255 NA non-coding upstream 273470 7195275 ~ 7195494 (+)
G141254 NA non-coding upstream 275337 7193425 ~ 7193627 (+)
G141364 NA non-coding downstream 29158 7501157 ~ 7501487 (+)
G141330 NA non-coding downstream 30067 7502066 ~ 7514879 (+)
G141378 NA non-coding downstream 57800 7529799 ~ 7530002 (+)
G141380 NA non-coding downstream 64118 7536117 ~ 7536333 (+)
G142360 NA non-coding downstream 245121 7717120 ~ 7722230 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 511197 6951132 ~ 6957767 (+)
G141082 NA other upstream 568041 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 758332 6705983 ~ 6708513 (+)
G141052 NA other upstream 1197364 6271367 ~ 6271600 (+)
G140924 NA other upstream 1503638 5963206 ~ 5965326 (+)
CI01000027_07947743_07951397 NA other downstream 478704 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 554398 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 786338 8255073 ~ 8264897 (+)
G143033 NA other downstream 2256816 9728815 ~ 9729551 (+)

Expression


Co-expression Network