CI01000027_07618538_07623119


Basic Information

Item Value
gene id CI01000027_07618538_07623119
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7617285 ~ 7624255 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07618538_07623119.mRNA
TTATAAAAAAAGATACTTTAACTCAAGTATGATATACTCAAAATGTTTTATTTAATATGGTGAATGAAGTGTATTTTTAGCTGTGATTCAGGATGCATTCAGGTATTTCTGTCATATTTAGGGTTTGTTTTTTACCTCTTTGTATTGCCTTTTATTGCTTTGTAAAAACATTATTACATTATCTATTATGTTAATATCTACATATGCTAATACATTTAAAAAAAAAAAAAATTTTTTAACATGAATATGTTTTGAACAAACAATTAACAACAATATACACTGCCTGACCAAAAAAGCAATGTTATATGTTTGGCAACAGTTCTTCTAACCCTAATTAAAGGAGTGTGTAGCTTTTCATTTCTTAAACAACCATGTATTAAGATGTATCATGGCCATATTCCCGGATGACAATGTCAAGATTCATCAGGCTAAAATTGTGAAAGAATTGTTGGGAGGATGAAGAATCATTTTCACACATGAATTGGCACCTCTGAGTCCAGACCTTAATTTTATGAAAGTCTTTGCGATGTGCTGGAGTAGACTTTACAGAGTGCTCACCTCTTGCATTGTTGACTCTTTCACATTTTGAGCCTGATGAATCTTTTTGGCCAGGCAGTGTATTTAACCCATATTAATAAATGATGTTAAAATTGATGTTGACAATTGAATCTAATGGAACCTTATTGAAAAGTGTTACTAGCAATCTTTCAGCATTCCCATTCATCTCAATGATAGTTGCTTGGTTGGCGCAAGACCCCCCTGAAGTACATTATTAGAAATCTGTCATCTTTGCTCATGGTGGCTCAGTTCTGCAATTAATCACCTGAGCTGTAAAGAAAGTAACAAAATGGCATATGTTGGCTCAAATTCATCTCTTAGTAGGTAGAAGCTAGCCAAATTAGCCAAACAGCAGCACAGATAGGTTGCAAGATATGCCCTCATCCATGAAAACTAAGGTGAAAGACTAGGTACATTAAGCTGATCTTTTTTTTATTTTTTGAAGTGTGTCAAAGTACAAAAATCATCATTGGAAACTAACTAAGGTGAATGAATAAAGTTTTCTTCTCTGAGGTGAAAACAAGATTACAGCAGCCTTTCTGGCCCAAATATAGATGGTATGGGTCAGTGAAACTGTAAATTCTCCAAAAAGTAGTATTTTTATATACATATTATATACATATTTTAAACTCATATGATAAACCTGTGTGTGTGTGTAGTGTTCCTGATCAGTTGGAAGCGTGAGCTGCAGTGATATGAGTCTCTGGTTTGGTGAAGGCAGATCGTTTCTGCTGCTTTTGCTGCTGCTGTGCTGTGGGACACTGCTGACCTGGACCAAGACCAGCCGACACCAAGGGTCCCGCACACCCGCAAGCATCCACACTGATGACATCATACTGGCTGTCATACTCCCTCAACACAATACATCCTACCCCTGGGCATGGCCCCGCGTGGGACCTGCTCTGGACCGCGCCATTGCTCGAGTCAATGCCGACCCCACTCTGCTGCCCCGGCACCACCTCCGCCACATCTTTGCAAACAGCGAGGATGGGGATGGTATCTGCTCTGAGTCCATCGCCCCCCTCATGGCCGTGGACCTGAAGTTCGAACACAACCCGTGGGCCTTCATAGGACCTGGCTGCGACTATACCTCCTCCCCAGTTGGGCTGTTCACTGCTCACTGGGGCCTTCCAATGATCACGGCAGGGGCCCCTGCTGTAGCTTTCCTGCACATGGAAATGTACACCTCCATCACCAACACGGGCCCCACACACAAGAAACTGGGTGAGTACGCCCTCCACCTCTACAGACATTTCGGATGGCACCAACACACCCTGCTGATGTTCAGTGACACCAAAATGGGCGAAAGGGCGTGCTACTTTGCCCTGGAGGGGCTTTACACAGAGATGCATGAGGAAAACATCACAACCATGGACCTGGTATTTGAGGAGAACAAAGGACCTGTTAATTATTCCGAACTCCTACACAAGATCAAGGATGATGGAAGAGGACAGACAAAAGCCTGGGCGATCGCAAAGAGTCAGTATCAGAATAAGTATTATATTTCAGTGGGTTATAAGTACAAACACTTAATAGAACCATCCACTGATCTCGGAAGAGCAGAAATGCTCTTCCTCACCTCCTGCCTCTTTCCTCTCAACCCTGTAAAAACATCCTCACATCATCAGCAGCAGGAAGACAACACATGGAGGCACACCGCCTCCTCTGTAGCATCAGTCTACCTTGTCGTCATCTTTTCGACTAAAATGCCAATCTTTGTGACTAGACCTTCGTGCCCTCTTGTCGTCATGGTTGCCGAGCGCAAGAGCGGCCATGCTGAACTAAACTACCCAGAAGGCCGTGGTTCGCTTCTCTCTGCATTTCTATCCATCTGGATCAGCTTAAAAATTAATCTGAACTGAGGTGTAGAGAAGGATGGAAAAGAAAAAAGAAAAAACTACAAAAATTTGTAGACTTATAGCACACACTTTTATAATCCTAGAACAGCTTCTCTGCTTGATGGAGGAATGCTGTATTTAGATATTTCAGGTCGATATTTCCCATCATTTCTGACCTTTGGATATAAAGAAGAGTAACTCAATACCTCCAGTACTAAACCCAAACATATCAAAAGATTCATTCATTGAGGTGAAAGCTTGTCTTTAGTTCGATCTTGAATCTGCCCCCCATGAACAGAATACTCAAGTCATAATGTTCTCTTCGTGACAGCAGAACATAAGGTTCAGTTTAATACAAGAATGACCTCACATCCTCTAGAATGAGCTAATGTTAGGCAGACATCCCTTACATCACACAGATTCCTGCGCTAATATAATTTGTAACCCTATACTGGCTTATGTTAAACAGCATTAGTAGAGAAACATGACAGACTTGACTTGACACGACAGACATAAATTAGATTATTTTTACCGTTTTCTTAGTGCCAGAACCTGAACCTTTTTGTTGCTTACAGTCAAACATTAGGTTTTCCGTTAAACAGTTATCTCTAACTGTGCTCAGTTTTTTTTCCCCCAAGGTTGATTTTGTGTTTAGATTTATGAACTTCATTGTGTTGGTCTATTGTTGATACGCATGATTGGAAATCTCCATTTTTGGGTAAAATCACCATTTTAAAGATTAGCTGTTTTATTTTTTTATGTTGATGGATTTCTTTTTTTAAACAGGAAGTTTCTGTAGGAAATATTAGGGTATCAGCTTTAGTTAAGTCTCATTCATGAATCATGATTTGCTACTTGTTGGTTGCAGGTGGTATTTGGGCGTGGGACTCTCTTGTTCTAGAGAGGATTTGATTGGACAAAAATCTGTGTAGTGCAAGATGAGTCATTTGTATTTTTTGTCTATTTTCCTAGAAGAGAAAGACTGCGTAAATTTGTGTTTAAATTCTAAAAGTGAATTTTGTCAATGTTTCGAATTACACTAGACATCAAACATGGACTAAAATCCACGAAACTCTTTAAAAAATGTTAAAATAATGATGTCTTTAAGTTATAAAAAAGAGTCTGGGTCATAAGATGTACTGGTGTGCCATTTCATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07618538_07623119.mRNA True 3556 mRNA 0.40 4 7617285 7624255

Neighbor

gene id symbol gene type direction distance location
CI01000027_07605090_07608785 NA coding upstream 7745 7604860 ~ 7609540 (+)
CI01000027_07561011_07562818 NA coding upstream 53440 7560891 ~ 7563845 (+)
CI01000027_07545610_07559939 NA coding upstream 57127 7545610 ~ 7560158 (+)
CI01000027_07541256_07541975 NA coding upstream 75133 7541256 ~ 7542152 (+)
CI01000027_07529488_07537870 DCST2 coding upstream 78174 7529488 ~ 7539111 (+)
CI01000027_07634015_07663101 NPR1B, NPR1 coding downstream 9709 7633964 ~ 7663410 (+)
CI01000027_07666350_07684399 GON4L coding downstream 42095 7666350 ~ 7684460 (+)
CI01000027_07686575_07690215 GPATCH4 coding downstream 62320 7686575 ~ 7690347 (+)
CI01000027_07695223_07701346 NA coding downstream 70791 7695046 ~ 7701823 (+)
CI01000027_07789066_07797594 NA coding downstream 164381 7784774 ~ 7800723 (+)
G141380 NA non-coding upstream 80952 7536117 ~ 7536333 (+)
G141378 NA non-coding upstream 87283 7529799 ~ 7530002 (+)
G141330 NA non-coding upstream 102406 7502066 ~ 7514879 (+)
G141364 NA non-coding upstream 115798 7501157 ~ 7501487 (+)
G141355 NA non-coding upstream 283148 7333909 ~ 7334137 (+)
G142360 NA non-coding downstream 92865 7717120 ~ 7722230 (+)
G142446 NA non-coding downstream 180287 7804542 ~ 7804806 (+)
G142452 NA non-coding downstream 189405 7813660 ~ 7828067 (+)
G142465 NA non-coding downstream 206737 7830992 ~ 7907635 (+)
CI01000027_07469157_07471720 NA other upstream 145571 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 659518 6951132 ~ 6957767 (+)
G141082 NA other upstream 716362 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 906653 6705983 ~ 6708513 (+)
G141052 NA other upstream 1345685 6271367 ~ 6271600 (+)
CI01000027_07947743_07951397 NA other downstream 326448 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 402142 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 634082 8255073 ~ 8264897 (+)
G143033 NA other downstream 2104560 9728815 ~ 9729551 (+)

Expression


Co-expression Network