CI01000027_07690842_07692012


Basic Information

Item Value
gene id CI01000027_07690842_07692012
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7690638 ~ 7692012 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07690842_07692012.mRNA
ACTACATTCATATGTCTAAATACAACAATATTTTGGCCCAGCAAACTAAAGAGAGAGCCACCAACCTGCAGTTACTGGAAGTGCTGGAGCAGGAGAAAGCATGGCTGGTGACACAGGGTCAACAGATGAACAGCACACTGGACTTCATACTTCATAAAAGCAGATTTCCAGTGGATAAGTACTGTCAGTCCACTGGGAATGGGGTTCGGTGTACATCCTGCCCTCAAAACTGGATTCAAAATGGCTCCAGCTGTTACTATTTCCATTGGCCTACAGGACACCCCTGGTATAATTGGAAAGCGAGTAAAGAATACTGCGAGGAATATGAAGCTCATCTGGCTATAATAGACAGCGAGGGTGAACAGGAATTCATCAATCAGCACACTAATACTGACCCACAATACGGGTACTGGATTGGACTCTTTGAAAATGCGGGAAAAACTTGGGTCTGGACCAATGGAACTCCGCTTGAGACAGGGTAAATTGAGTAATTTAATATATAAATTAAAAAGCTTTTGATTTTTCAAACTATTAACTAAACTATTAATTTAATTTTTTATAATTATATGATCATTTTTACAGTGGTAAGAACCACTATTTATGTAAAAAATAACCAAGTTTAAATATTAGTTTTCTTTTTAAAATGAAATTATTTCCTTTTGATAAATCATGAAAAGATAAATAAA

Function

NR:

description
spleen c-type lectin receptor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07690842_07692012.mRNA True 686 mRNA 0.36 4 7690638 7692012

Neighbor

gene id symbol gene type direction distance location
CI01000027_07665461_07665871 NA coding downstream 24767 7665302 ~ 7665871 (-)
CI01000027_07591755_07601032 NA coding downstream 89606 7590481 ~ 7601032 (-)
CI01000027_07581095_07587079 SYT11B coding downstream 103559 7580793 ~ 7587079 (-)
CI01000027_07564783_07576342 NA coding downstream 113838 7564592 ~ 7576800 (-)
CI01000027_07520072_07528984 DCST1 coding downstream 161654 7519485 ~ 7528984 (-)
CI01000027_07692521_07693509 NA coding upstream 509 7692521 ~ 7693608 (-)
CI01000027_07709714_07744049 MEF2D coding upstream 16545 7708557 ~ 7744049 (-)
CI01000027_07821062_07827997 RHBG coding upstream 129050 7821062 ~ 7828092 (-)
CI01000027_07850115_07861432 BCAN coding upstream 157691 7849703 ~ 7861432 (-)
CI01000027_07876459_07878548 NA coding upstream 183481 7875493 ~ 7878548 (-)
G142307 NA non-coding downstream 147683 7539471 ~ 7542955 (-)
G142289 NA non-coding downstream 223116 7428257 ~ 7467522 (-)
G142320 NA non-coding downstream 237034 7448773 ~ 7453604 (-)
G142254 NA non-coding downstream 305147 7360940 ~ 7385491 (-)
G142248 NA non-coding downstream 336400 7335871 ~ 7354238 (-)
G143304 NA non-coding upstream 83391 7775403 ~ 7775628 (-)
G143334 NA non-coding upstream 101696 7793708 ~ 7798644 (-)
G143341 NA non-coding upstream 112303 7804315 ~ 7804766 (-)
G143371 NA non-coding upstream 252836 7944848 ~ 7945079 (-)
G143372 NA non-coding upstream 254266 7946278 ~ 7946521 (-)
G143267 NA other downstream 16869 7669329 ~ 7673769 (-)
G142299 NA other downstream 250447 7439178 ~ 7440191 (-)
G142209 NA other downstream 532640 7153623 ~ 7157998 (-)
G142203 NA other downstream 547575 7141094 ~ 7143063 (-)
G141638 NA other downstream 893931 6788627 ~ 6796707 (-)
G143325 NA other upstream 192523 7884535 ~ 7886049 (-)
G144365 NA other upstream 2846768 10538780 ~ 10542148 (-)

Expression


Co-expression Network