CI01000027_07821062_07827997 (RHBG)


Basic Information

Item Value
gene id CI01000027_07821062_07827997
gene name RHBG
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7821062 ~ 7828092 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07821062_07827997.mRNA
ACTCTGCCTCCAGACTCATCAGAGCCTGTGCCCTGCTCCAGAAAGAGGGAAGGGGATAGAGAGTGAGCAAAGGATACTGGCAAAAGGGAAGCACCATGGCTGATTCTTCAACTAACATGAGGCTACGGCTGCCGCTGATATGCATCATCTTGGAGGTCATCCTCATCATCCTCTTTGGAACACTGGTGGAGTATAACCATGACACTGATGCCAAGCTGTGGAATAAAAATAGAACTGATCCTAGAAAGGATTATGAGAATGAGTTCTACTATCGTTATCCCAGTTTCCAGGATGTTCACGTGATGATCTTCGTCGGCTTCGGATTCCTGATGACATTTCTACAGCGATATGGATTCAGTAGCGTCGGATTTAACTTCCTCATCGCAGCCTTTTCTCTACAGTGGGCCACACTTATGCAGGGCTTTTTGCACGGCATGCACGGTGGCAAGATTCAAGTTGGTGTGGAAAGCATGATAAATGCAGACTTCTGCACTGGTGCTGTGCTGATCTCTTTTGGCGCCGTTTTGGGGAAGACCAGTCCTGTGCAGTTACTTGTTATGGCCATTTTTGAGGTGACATTGTTCGCCGTTAATGAGTTCATTCTGCTTTCTATCCTTGGGGCCAATGACGCTGGAGGATCCATGACCATTCATACATTTGGTGCATACTTCGGTTTAATGGTGACCCGTGTCCTGTACAGACCAAACCTGGACAAGAGCCAACACAGAAACTCGTCTGTCTACCAGTCTGACCTCTTTGCGATGATCGGGCTCTTCAAGCCACTAAAGCTTGGGTTCTGCTCAGGTACCATCTATTTGTGGATGTTCTGGCCCAGCTTCAACTCAGCCATTACAAACTACGGGGACCCCCAGCACAGAACTGCCATGAACACTTACTACTCTCTGGCCGCCTGCACAGTGGCTACATTTGCTTTCTCCTCCCTCGTCAACCCAGAAGGCAAATTGGACATGGTGCACATTCAGAATGCCGCACTGGCTGGTGGTGTTGCTGTGGGAACAGCTGGGGAGATGATGCTGACTGCATTTGGCTCTATGATCGTGGGATTCCTAGCTGGAACTATTTCAGTCCTGGGATACAAATACCTCACGCCGGTTTTGGAGTCGAAACTGAAGATTCAGGACACTTGTGGCATTCATAACCTGCATGGAATGCCAGGAATTCTGGGAGCTGTGGTGGGTGCTGTGACTGCTGCCGTGGCATCCAAGGATGTATATGGAGAAGGATTGCAAAGAGTTTTCGGTGATGTTAAAAATGAAGAATGGAACCCAGAATCTAAGGGAGGGTTTCAGGCTATCTCCCTGGCTGTCACATTGGGAATTGCTCTGTTTGGTGGTCTAGTTACAGGGTTCATTTTGAAGTTGCCAGTCTACGGTGCTCCTCCAGATACTCACTGCTTTGAAGATGGACTCTACTGGGAG

Function

symbol description
rhbg Predicted to enable ammonium transmembrane transporter activity. Acts upstream of or within ammonium homeostasis and ammonium transport. Predicted to be located in basolateral plasma membrane and cytoplasmic vesicle membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including ball; gill; integument; retina; and yolk syncytial layer. Orthologous to human RHBG (Rh family B glycoprotein).

NR:

description
Rhesus precursor protein 2

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K06580 SLC42A, RHAG, RHBG, RHCG, CD241; ammonium transporter Rh

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07821062_07827997.mRNA True 1439 mRNA 0.49 9 7821062 7828092

Neighbor

gene id symbol gene type direction distance location
CI01000027_07709714_07744049 MEF2D coding downstream 77013 7708557 ~ 7744049 (-)
CI01000027_07692521_07693509 NA coding downstream 127454 7692521 ~ 7693608 (-)
CI01000027_07690842_07692012 NA coding downstream 129050 7690638 ~ 7692012 (-)
CI01000027_07665461_07665871 NA coding downstream 155191 7665302 ~ 7665871 (-)
CI01000027_07591755_07601032 NA coding downstream 220030 7590481 ~ 7601032 (-)
CI01000027_07850115_07861432 BCAN coding upstream 21611 7849703 ~ 7861432 (-)
CI01000027_07876459_07878548 NA coding upstream 47401 7875493 ~ 7878548 (-)
CI01000027_07888504_07893711 TLR18 coding upstream 60412 7888504 ~ 7893711 (-)
CI01000027_07904624_07919811 NA coding upstream 76532 7904624 ~ 7919811 (-)
CI01000027_07924688_07926502 LINGO4B coding upstream 96038 7924130 ~ 7926502 (-)
G143341 NA non-coding downstream 16296 7804315 ~ 7804766 (-)
G143334 NA non-coding downstream 22418 7793708 ~ 7798644 (-)
G143304 NA non-coding downstream 45434 7775403 ~ 7775628 (-)
G142307 NA non-coding downstream 278107 7539471 ~ 7542955 (-)
G142289 NA non-coding downstream 353540 7428257 ~ 7467522 (-)
G143371 NA non-coding upstream 116756 7944848 ~ 7945079 (-)
G143372 NA non-coding upstream 118186 7946278 ~ 7946521 (-)
G143316 NA non-coding upstream 122612 7950704 ~ 7985293 (-)
G143320 NA non-coding upstream 127976 7956068 ~ 7964780 (-)
CI01000027_07993673_08002214 ONECUTL non-coding upstream 175274 7993335 ~ 8006263 (-)
G143267 NA other downstream 147293 7669329 ~ 7673769 (-)
G142299 NA other downstream 380871 7439178 ~ 7440191 (-)
G142209 NA other downstream 663064 7153623 ~ 7157998 (-)
G142203 NA other downstream 677999 7141094 ~ 7143063 (-)
G141638 NA other downstream 1024355 6788627 ~ 6796707 (-)
G143325 NA other upstream 56443 7884535 ~ 7886049 (-)
G144365 NA other upstream 2710688 10538780 ~ 10542148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00012492 NA coding CM030138.1 CM030138.1 19617738 ~ 19627369 (+)