CI01000027_08091338_08097220


Basic Information

Item Value
gene id CI01000027_08091338_08097220
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8091293 ~ 8097220 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_08091338_08097220.mRNA
ATGAAGTACGTCCCTCAGTGGGACTCCCTCATCTTTCTAGGAACTCCCATTATTGAGACAGTGGAGGACATGATAAAAATGGGTGTTTATGTCAATGATTTAAACCTGCACGACTCGAGCAGAGAGCTCATCCTGGCCGGAACACAGCAATCAGCCGAGCTGCAACTGGCACTTGACCAGGAGCAGCAGAAGTATGCACAGCTGCAGGAGATCATTAAAAAGCTGGATGAGGAGAAGAAGAGAGGAGACTCCCTGCTGTACGCCATGATACCCAAAGCAGTGGCGGACAGACTGCGCAAGGGAATCACAGCCCTGGAGACATGTCAGGTGTTCCCAGACGTGACTATCCTGTTCAGCGATGTGGTGAAGTTTAATGAGATCTGTATCCACATCACCCCCATGCAGGTGGTGGACATGCTAAACGAGATCTACATCGTTTTTGACACACTCAGCGAAAAGCACAATGTTTATAAGGTGGAGACCATTAGGGATGCCTACATGGTGGTGGCAGGTGTGCCCAATAAAACCACATTTCATGCCCACCACATCTGTGACATGGCTCTAGATATGTTAAGCTCCATTGATCACCTAAAAGACCCCTCCACCGGGGACAACATCCAGATCCGTGTCGGCATTCACTCTGGAATGGTGGTGGCAGGGGTGGTGGGTCTGAAAATGCCCAGGTATTGTCTGTTTGGGGACACGGTGAACACGGCTTCTCGAATGGAGTCAAATGGCGTGGGCATGCAAATCCACATCAGTCAGACCACCAAAGACCATCTGGAGCATGAGCCATACATCATTGAGGAACGTGGAAAGATTTTTGTTAAGGGAAAAGGTTATATGAAGACATACTGGCTGAAGGGAAAGAAAGATCTGTCATTTAAGACTCCAGCAGAGCTCAGATACAGCAATGAGCAGAAGGACTCAGAGGACAGAAGCTCAAATGGGTCCACTTGCACCAACAGCAAACATTCCCCATCAAACCTGAACACCCCCAATGAGGAGCAGGCTGAGGGCAAGCCCACTCCCACTGACCTGCCCTCTGATGCCCTACCAGCACTAGAGGGCGCTCCAGACACAAACACATTCACAAATGAGTCCCAGCAGGACAAAGAAAAGGTTAAAAAGACAAAGAATAACAAAGGAGGGAAGGCAGAAAATGCTTCGGGTAATGCTCAGGAAAGCACTCCACCTGCTGGTGGTCAGGAGAATGCAGCTCCAGAGCTTAACAACAAAAAACACAGTTTCAGAAGCCAGTACTCACGATTACCAGCGAACCTCCCCATGCGAAGCACAGCCTGCAGTCTGCTGTAAATATCCAGGAGAAATTTACAAAATAGTACCTATTATATAAGTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_08091338_08097220.mRNA True 1362 mRNA 0.49 9 8091293 8097220

Neighbor

gene id symbol gene type direction distance location
CI01000027_08081583_08083496 TNFAIP8L2B, TNFAIP8L2 coding downstream 7797 8081269 ~ 8083496 (-)
CI01000027_08073979_08077754 SCNM1 coding downstream 13539 8073661 ~ 8077754 (-)
CI01000027_08016916_08025375 NA coding downstream 65838 8016529 ~ 8025455 (-)
CI01000027_07993673_08002214 ONECUTL coding downstream 87628 7993335 ~ 8006263 (-)
CI01000027_07924688_07926502 LINGO4B coding downstream 164791 7924130 ~ 7926502 (-)
CI01000027_08134523_08134951 NA coding upstream 37267 8134487 ~ 8135309 (-)
CI01000027_08285855_08291534 NA coding upstream 188549 8285769 ~ 8292823 (-)
CI01000027_08422679_08426771 CCT3, TCPG, CCT3.L coding upstream 325459 8422679 ~ 8426771 (-)
CI01000027_08429132_08434558 NA coding upstream 331092 8428312 ~ 8436258 (-)
CI01000027_08443968_08446252 NA coding upstream 345957 8443177 ~ 8446436 (-)
G143393 NA non-coding downstream 562 8090002 ~ 8090731 (-)
G143389 NA non-coding downstream 38435 8052511 ~ 8052858 (-)
G143314 NA non-coding downstream 57312 8032981 ~ 8033981 (-)
G143385 NA non-coding downstream 68311 8022754 ~ 8022982 (-)
G143383 NA non-coding downstream 70034 8020151 ~ 8021259 (-)
G143403 NA non-coding upstream 18619 8115839 ~ 8117546 (-)
G143422 NA non-coding upstream 73366 8170586 ~ 8170812 (-)
G143502 NA non-coding upstream 130931 8228151 ~ 8228372 (-)
G143504 NA non-coding upstream 135965 8233185 ~ 8233388 (-)
G143476 NA non-coding upstream 180048 8277268 ~ 8319468 (-)
G143325 NA other downstream 205244 7884535 ~ 7886049 (-)
G143267 NA other downstream 417524 7669329 ~ 7673769 (-)
G142299 NA other downstream 651102 7439178 ~ 7440191 (-)
G142209 NA other downstream 933295 7153623 ~ 7157998 (-)
G142203 NA other downstream 948230 7141094 ~ 7143063 (-)
G144365 NA other upstream 2441560 10538780 ~ 10542148 (-)

Expression


Co-expression Network