CI01000027_08701843_08702938


Basic Information

Item Value
gene id CI01000027_08701843_08702938
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8700782 ~ 8702938 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_08701843_08702938.mRNA
ATCCAGCCAGCAAACCACAAAGATGACCCTTACAGAGGGTTCATCGAATGTGAGCTTCACATCAACATCAGCTCCTCCCCTAACAACCAATACTTCTCCACCATACCGTGAACCTTATTTACACAGACTGGCCCACTTGGATGAGGGTCTCTATAATGACTTTTACAGCCTGTGGATCGCTCTGGTGGTCATTAACACACTTATCTTTATGGTAGGGATGACTCTGAACAGTCTAGCTTTGTATGTCTTCTGCTTCAGGACCAAGCCGAAGACTACATCAGTCATCTACACCATTAACCTGGTTGTGACGGATCTGTTGGTTAACCTTTCCCTCCCCACTCGTATCATATTGTACTACAGTGGAGGAAAGTGCCTCAACTGTTCCTACATGCACATATTCAGCTACTTTGTCAACATGTACTGTAGCATCCTCTTCCTCACCAGCATCTGCGTGGATCGCTACCTGGCCATCGTGCAGGCGGAGGCCTCACGGAAGTGGAGGAACCCCAGTGTGGCCAAAGCAGTGTGCGTCTGCATTTGGCTGTTTGCCATCATCGTGACCTACTCACTTCTCACAACGGCCTTCAAGCACTCAGGCTGCTGCCTCTCCAAACTTTTCGCACTGACCGTATTTGAGTTCTTCCTGCCGATGGTGATCATCGTAGTGTTTACTATTCGAATCATGTGCGCCCTTTCCAGCCCCGGCCTCATGCAGCAGAGCCGCGACAGACGCATGAAAGCTGTACAGCTGCTGTCGACCGTGCTGGTTATCTTCACTGTCTGCTTCACGCCGTTTCACATCCGTCAAGTTCTGTTTTACTTCCATCCTGATCTGCCTCATCATGTGATTGTGTACCATGTGACTGTCACCCTCAGCAGCCTGAACAGCTGCTTGGATCCTGTGGTCTACTGTTTCGTCACCACTAACTTTCAGTCTACCATGAAGAGATTTTACAGGAAGATGGAAAGAGAACAGACGAGTGGAGACATTATCAGCATGCAGAAGAGCTCAAAGGCTTCAGGCATAGTGATTGCTATAGCTAATAGTATAAGGATAAACATGAGCCCTGTTCAGCAGGGAAGCCGACCCGCATAAGGGAGCGCACATGTGTCCTGTACAGTATTCGGATGGTTGCCATTACCATGTCATACTAAGGCAAAACCACTGGCATAGATGAGACTTTGTTTCTCTGTGTACTGTAAATACCTTAATATAGAGATTTTATGAGCTTGCATTTCATTTCACATGTGACATTGTAGATTTACATGAAGATTTATATCATTGGCTATCATATTGTTACTGTACTGAAGCCAAAACAAATTATTAAAACTTTATCTGAAAAATATTGTCTTTTTATAAAACGGTTAGCTCCTGTCCTTGATTCTGATTGGTCAATAGCTGTGTTTTATTCACGATAAAACACGGCTATGACCGCTTCACCCAACGGTTCTGTGTATCACAACACCCTTTTAGCAACCACTCTTAGCAACTTAAACTGATCTCAATTGATATTGTTCATTGACGCTTGCTGTATTATGTAGAAGAGTATTGTGAGAAAGAGATTGAGTGAGCGAGTTTATTATCTGCTTTCAGATTTAGCGTTTTCCTTCAGGTCAGTCCTATGTTCATAATAAAACATCAGTTTAAATGTTCGATGTATTATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCCGTGACTGACAGCTCTAGTCAAAGCATTTGTCAGTTGTGTCTTGTTCCGTGTTCACAACAATTCAGTCTTTTCAATGTAAAAGTCTTCGCTACTGACTAACACACTCATAAAGACAATCTTTGCCGCCATGGCGTAATAATGTAACTTCTGTTGCTGTTCACGGTCAGGGACTATTTTTTCCGACAGAAGGAATGCTTTTAGTTAAAGTTTACTTCATGAAAGTTGCATTTACTTCATGAAAGTTGCATATTTTTGGCTTTAATATTTGTATTGTGTGATAACCATTTTATAAAAGCAATAAGGTACTTGAGGCTAGTGCTGTATGAATAAGTCACGGCTGAAAGGATGCTTCGTGTCGTGCCTAGCAACACCCTTCAGCCGTGACTTATTCACGATACAGCACAGCCTCGAGCACCTTATTGCTTACATATCTACTGTGTCTTTTTTCTAACCACTATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_08701843_08702938.mRNA True 2157 mRNA 0.43 1 8700782 8702938

Neighbor

gene id symbol gene type direction distance location
CI01000027_08688706_08696073 SLC45A4 coding downstream 3413 8688691 ~ 8697369 (-)
CI01000027_08671118_08685781 NA coding downstream 15001 8671095 ~ 8685781 (-)
CI01000027_08595524_08646502 NA coding downstream 54280 8594938 ~ 8646502 (-)
CI01000027_08568349_08570750 NA coding downstream 130032 8567985 ~ 8570750 (-)
CI01000027_08537911_08550747 LDLRAD4B coding downstream 149324 8536827 ~ 8551458 (-)
CI01000027_08713799_08734144 DGAT1B coding upstream 10616 8713554 ~ 8734144 (-)
CI01000027_08820113_08821952 SCRT1A, SCRT2, SCRT1, SCRT1B coding upstream 117081 8820019 ~ 8822352 (-)
CI01000027_08864430_08897266 MROH1 coding upstream 161330 8864268 ~ 8897266 (-)
CI01000027_08940113_08943539 NA coding upstream 236928 8939866 ~ 8943539 (-)
CI01000027_08946941_08955434 CSK21, CSNK2A1.S, CSNK2A1 coding upstream 242375 8945313 ~ 8955434 (-)
G143608 NA non-coding downstream 16356 8684105 ~ 8684426 (-)
G143603 NA non-coding downstream 38976 8661587 ~ 8661806 (-)
G143602 NA non-coding downstream 39561 8660958 ~ 8661221 (-)
G143601 NA non-coding downstream 40269 8660060 ~ 8660513 (-)
G143598 NA non-coding downstream 43102 8657309 ~ 8657680 (-)
G143615 NA non-coding upstream 6189 8709127 ~ 8709529 (-)
G143467 NA non-coding upstream 8865 8711803 ~ 8713014 (-)
G143622 NA non-coding upstream 35676 8738614 ~ 8738830 (-)
G143623 NA non-coding upstream 35909 8738847 ~ 8739070 (-)
G143636 NA non-coding upstream 61539 8764477 ~ 8764696 (-)
G143325 NA other downstream 814733 7884535 ~ 7886049 (-)
G143267 NA other downstream 1027013 7669329 ~ 7673769 (-)
G142299 NA other downstream 1260591 7439178 ~ 7440191 (-)
G142209 NA other downstream 1542784 7153623 ~ 7157998 (-)
G142203 NA other downstream 1557719 7141094 ~ 7143063 (-)
G144365 NA other upstream 1835842 10538780 ~ 10542148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010796 gpr20 coding NC_007127.7 CM002900.2 30933249 ~ 30934319 (-)