XLOC_008552 (AL954322.1)


Basic Information

Item Value
gene id XLOC_008552
gene name AL954322.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 27296676 ~ 27300833 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017087
ggttcattgcaatcccaaggttcactgcggttttccacaagatgcagaaacttttgacatatgaattcatcttgactaaggaactcttcacagcactgcagctaaacagtcacaacctcacagagctgcacaactgccccactcagatcagtgttgaagctggaacctcatcttgtgtacagcaaaggcagagctgaaaattcactgtttgtcttgtattgtgtgtggcaaaacctggaataacacttgggagccctccaggaattgctgacactttacgcccaagtctcctcatgctaaccggattgcaatatgacagtctagtcagcataaacacctggactcaccaagcacactttggttctcagtgttttgtaaaaatagtttttgctattcttcagtaaatacttgaatatgttttgaacttattctacttttgatgtttaagttcagaaagttgttattataaacataatttgcatttgtcatgaacttgacttcttgttgttgtgaaagctgtttattatgatggcatttccaaaggcatcatttgaaaagattttttgcagtgcagttttacttgagcttgacataccagatgtatgacatgaataaatatcacaaaataaatataataataataatacaaaatatacatttccttcaattataattgtttttattcatttatatatgtatggtaatatattattgcattaaaaactcataaaatatatatttttggttaaaatatatatttttgcatttttgtgtgatttttattatttatttttatttgtggcattataaataaattataaatgtttcattaaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096918

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017087 True 836 lncRNA 0.32 4 27296676 27300833

Neighbor

gene id symbol gene type direction distance location
XLOC_008550 ppm1da coding upstream 357272 26933196 ~ 26939404 (+)
XLOC_008549 NA coding upstream 615977 26675985 ~ 26680699 (+)
XLOC_008548 slc47a3 coding upstream 685819 26600611 ~ 26610857 (+)
XLOC_008547 slc13a5b coding upstream 702992 26573676 ~ 26593684 (+)
XLOC_008546 CABZ01021926.1 coding upstream 856449 26440113 ~ 26440227 (+)
XLOC_008553 NA coding downstream 31024 27331857 ~ 27332639 (+)
XLOC_008554 tbx2b coding downstream 63561 27364394 ~ 27371340 (+)
XLOC_008555 tbx4 coding downstream 83965 27384798 ~ 27411695 (+)
XLOC_008556 BX005270.1 coding downstream 174425 27475258 ~ 27475374 (+)
XLOC_008557 AL954187.4 coding downstream 268248 27569081 ~ 27569195 (+)
XLOC_008463 BX663520.1 misc upstream 6044394 21252191 ~ 21252282 (+)
XLOC_008544 CR848822.1 non-coding upstream 1190243 26106315 ~ 26106433 (+)
XLOC_008543 NA non-coding upstream 1394026 25896465 ~ 25902650 (+)
XLOC_008541 CT027805.2 non-coding upstream 1628975 25667587 ~ 25667701 (+)
XLOC_008558 NA non-coding downstream 409497 27710330 ~ 27725662 (+)
XLOC_008559 AL935164.1 non-coding downstream 493866 27794699 ~ 27794813 (+)

Expression


Co-expression Network