CI01000027_09398846_09400911


Basic Information

Item Value
gene id CI01000027_09398846_09400911
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9398846 ~ 9401795 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09398846_09400911.mRNA
GGGCTCGAGATTGTGAACCCACAGGCTGCAGAAAAGAAGGTGGCCGAAGCCAATCAGAAATATTTCTCCAACATGGCTGAGTTCCTCAAGATAAAGCGTGAAAAGGAGGACAAGGAAAACTGTCCAGCAGGGTATGTGAGACTAAATTCGAGATGTGACTTCAAAAATAACAGGAAGGTTTTTGTTTTACTTTACATGCACACTTCCACACAACAAAAATATTCAGCCATGGAATATTCAGCCATGGACAACCTAAAGGACACTGAAAGAAAGAAAAATAAGGTTTTTAACTTGTACATATTTTAATCTTTGTCTTTTTATTAGATATTTTTGAAGTGAGATCACTCATGCCATGTTTAACAGACAAATAATCACACGCCACTTTGAAGGCTGACAACGTCAACCCACCTTGCTTGTGAACATATGTAAGATAGATGCTACAGAACATTACCCTATTGACGCCAACTTTTCTGCGGTCTAGCAAAACCACATTTAGGTAATGATAAAGGTAGGGAGGTCGAGAGGAATTCAATTGCATAGCAATTTAATGGTCGACACATTATCTCGCAAGGCAAAGTCACAGTGCCTAGACACTCCCAGAGGGGCTCAATGAACTAAGAAAAACCAATCAATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09398846_09400911.mRNA False 636 mRNA 0.40 2 9398846 9401241

Neighbor

gene id symbol gene type direction distance location
CI01000027_09392689_09396015 PRPF31, PRPF31.S coding upstream 2831 9392689 ~ 9396015 (+)
CI01000027_09376781_09390767 LMTK3 coding upstream 7723 9376781 ~ 9391123 (+)
CI01000027_09369991_09372314 NA coding upstream 25539 9369991 ~ 9373307 (+)
CI01000027_09354981_09368973 TMC4 coding upstream 29384 9354981 ~ 9369462 (+)
CI01000027_09349353_09352981 MBOAT7 coding upstream 45696 9349353 ~ 9353150 (+)
CI01000027_09414743_09422093 SPHK2 coding downstream 11631 9412872 ~ 9422479 (+)
CI01000027_09424746_09432978 NA coding downstream 23505 9424746 ~ 9433471 (+)
CI01000027_09448387_09455263 NA coding downstream 45806 9447047 ~ 9455293 (+)
CI01000027_09459448_09462994 NA coding downstream 58207 9459448 ~ 9463100 (+)
CI01000027_09484034_09501412 KLHL32 coding downstream 82793 9484034 ~ 9502255 (+)
G143050 NA non-coding upstream 64967 9332701 ~ 9333879 (+)
G143045 NA non-coding upstream 92686 9305954 ~ 9306160 (+)
G143040 NA non-coding upstream 106200 9292221 ~ 9292646 (+)
G143039 NA non-coding upstream 107326 9291243 ~ 9291520 (+)
G143038 NA non-coding upstream 108203 9290413 ~ 9290643 (+)
G143009 NA non-coding downstream 3503 9404744 ~ 9406029 (+)
G143031 NA non-coding downstream 21681 9422922 ~ 9423148 (+)
G143004 NA non-coding downstream 22170 9423411 ~ 9424600 (+)
G143060 NA non-coding downstream 66582 9467823 ~ 9468042 (+)
G143062 NA non-coding downstream 69928 9471169 ~ 9472939 (+)
CI01000027_08255251_08264629 NA other upstream 1138020 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1366805 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1446904 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1927132 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2441079 6951132 ~ 6957767 (+)
G143033 NA other downstream 327574 9728815 ~ 9729551 (+)
CI01000027_09294505_09295818 RPS9.L, BRAFLDRAFT_126921, RPS9 coding upstream 17963 9294002 ~ 9295885 (+)
CI01000027_09243269_09246171 NA coding upstream 66933 9243148 ~ 9246915 (+)
CI01000027_09235085_09240022 NA coding upstream 73826 9235085 ~ 9240022 (+)
CI01000027_09220776_09224935 MLF2 coding upstream 88489 9220640 ~ 9225359 (+)
CI01000027_09203231_09208317 WNT4B coding upstream 105482 9203002 ~ 9208366 (+)
G143037 NA non-coding upstream 23969 9289638 ~ 9289879 (+)

Expression


Co-expression Network