CI01000027_09459448_09462994


Basic Information

Item Value
gene id CI01000027_09459448_09462994
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9459448 ~ 9463100 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09459448_09462994.mRNA
AGTGTTCAAATAAGAGCAGTGGTGAGACCCCTGATCATAAACTGATCTCTCATAGGGGCTTCAACTTGATATCTGGAATCCACTCTCCTGAGGTGGTGGATAAAATTCAGAACTTTGAGATTCGAGACTCCGATGTCTTTGTCATTACTTACCCCAAATCAGGCACTATTTGGATGCAGCAAATCCTTAGTCTAATAGAGGTCAAGGGAGATGTTACAGCAACAAGTAATCAGCTGAATTCTGAGCGCATGCCATGGATTGAGGTTTCAGACTCTGAGAAACAGTTTGTTTCTGCCCCCTCCCCTAGATTCCGTGTGTCTCATTTGTCATACAAATTCATGCCACTTGAACTGAAACAAAAGAAGGGCAAGGTCATCTATGTGGCCAGAAATCCAAAGGATGTTTTGGTGTCCTACTACCATTTTCACAAATATGCAAACATGCTGGAGACCCCAAAAGACTTTGATGATTTTTTTGAGAAATTCATGAAAGGAAATGTTTATGGTAATTGCTGGTTTGAGCATGTCAAGAACTGGTACTCCCACAAAGACGAGATGAACTTCTTGTACATTACATATGAGGAGATGATCAAGGACTTGCGGTCAGTGGTTGAAAGAATCACTTCGTTCTTGGGGAGGGACTTGACACCACAGCAGTTGAATGAGGTTGTTGAGCACAGTACTTTCAAAAATATGAAGAACAATCCTCAGGCCAATTACCAGCTGGTCTCTATCACCATGCTGAACCACGAGCAGGGAGCATTTATGAGGAAAGGAATCATTGGTGACTGGAGGAACTACTTCACTGTGGCACAGAATGAGAGATTTGACGAAGCGTACCAACAGAAAATGAAAGATGTTCCTCTTTCATTCATCTGGGACATGAATGATCCCATCACATCATGATTTTTTATTCAGTTTTTTCATGTGTACCCAGCAGATGACATCTAAGTTCTAAAGCTAGCTCTAAAACAATTATTTTATTAACAGATTTTATAGGCAACTTTACACC

Function

NR:

description
Amine sulfotransferase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09459448_09462994.mRNA True 1011 mRNA 0.41 6 9459448 9463100

Neighbor

gene id symbol gene type direction distance location
CI01000027_09448387_09455263 NA coding upstream 4155 9447047 ~ 9455293 (+)
CI01000027_09424746_09432978 NA coding upstream 25977 9424746 ~ 9433471 (+)
CI01000027_09414743_09422093 SPHK2 coding upstream 36969 9412872 ~ 9422479 (+)
CI01000027_09398846_09400911 NA coding upstream 58207 9398846 ~ 9401795 (+)
CI01000027_09392689_09396015 PRPF31, PRPF31.S coding upstream 63433 9392689 ~ 9396015 (+)
CI01000027_09484034_09501412 KLHL32 coding downstream 20934 9484034 ~ 9502255 (+)
CI01000027_09562530_09572606 NA coding downstream 99396 9562496 ~ 9572635 (+)
CI01000027_09661837_09663114 POU3F2B, POU3F2 coding downstream 198423 9661523 ~ 9663857 (+)
CI01000027_09767653_09768743 NA coding downstream 304553 9767653 ~ 9769402 (+)
CI01000027_09774092_09779035 NA coding downstream 310892 9773992 ~ 9779129 (+)
G143004 NA non-coding upstream 34848 9423411 ~ 9424600 (+)
G143031 NA non-coding upstream 36300 9422922 ~ 9423148 (+)
G143009 NA non-coding upstream 53419 9404744 ~ 9406029 (+)
G143060 NA non-coding downstream 4723 9467823 ~ 9468042 (+)
G143062 NA non-coding downstream 8069 9471169 ~ 9472939 (+)
G143064 NA non-coding downstream 11081 9474181 ~ 9474690 (+)
G143061 NA non-coding downstream 11909 9475009 ~ 9475610 (+)
G143066 NA non-coding downstream 13291 9476391 ~ 9478186 (+)
CI01000027_08255251_08264629 NA other upstream 1198622 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1427407 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1507506 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1987734 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2501681 6951132 ~ 6957767 (+)
G143033 NA other downstream 265715 9728815 ~ 9729551 (+)

Expression


Co-expression Network