CI01000027_09562530_09572606


Basic Information

Item Value
gene id CI01000027_09562530_09572606
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9562496 ~ 9572635 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09562530_09572606.mRNA
GTTTATAGAAGGCAGACCTAGGTATTACCGAGACATGAAACACACATTCGTGGGGCTGTACACAGGAGGGTATGATTACTCACGTAGCTCTGCGGCGAGCTTCCATTCTCTGTGCAGACAAGAACGTGCCTGTATCACCCCGCTGGTGCCTCGCTTTCACTCTGCCGTTGCCAGCGTGGCTCTGCGTGAGAGACAGAGGGAGAAAGACAGAGTGACGTGGAGAGAAAAAAAAGATGGAGAAACAGTAAAAGAGCTGGAATGCGAGCGTGCGCGAGTGTGTGCGCTGCCAGTGAAGAGCAGAGGAATTCTGCTCCACAAGAGATGTTTTCCTGGTGGAAGTGACTGCGTGTGTGGCGGAGTAGCATGCGGGCAGAGGACCAATGAGGTTGTGGGGGGGTCTAATGTAATCAAGACCCAAAACTGTTCTGCGTTCCTCCGACTCAATCAAATTTACCTGCCTCAAGAGTATGTGCGTTTGTATGTACGTGTGAACTCATTGGCTGTGTTGTGTTTTGGTCGAAATGACACTCGCCGGCCACGTAAAAATTCTTGTGACGGGGCTGCTGTCACGGCAGGGGAGCAGCCAATCTATCACGCCATCGAGACACATTCTTCTCACCTGCTCTGCGCCGGCACCGTGCCGTACCGGCCCTTTAATGAACAGCCAACATGATCCCGGCTGACAAGCAGGAAATGGATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09562530_09572606.mRNA True 702 mRNA 0.53 6 9562496 9572635

Neighbor

gene id symbol gene type direction distance location
CI01000027_09484034_09501412 KLHL32 coding upstream 60241 9484034 ~ 9502255 (+)
CI01000027_09459448_09462994 NA coding upstream 99396 9459448 ~ 9463100 (+)
CI01000027_09448387_09455263 NA coding upstream 107203 9447047 ~ 9455293 (+)
CI01000027_09424746_09432978 NA coding upstream 129025 9424746 ~ 9433471 (+)
CI01000027_09414743_09422093 SPHK2 coding upstream 140017 9412872 ~ 9422479 (+)
CI01000027_09661837_09663114 POU3F2B, POU3F2 coding downstream 88888 9661523 ~ 9663857 (+)
CI01000027_09767653_09768743 NA coding downstream 195018 9767653 ~ 9769402 (+)
CI01000027_09774092_09779035 NA coding downstream 201357 9773992 ~ 9779129 (+)
CI01000027_09783491_09789725 PRDM13 coding downstream 210856 9783491 ~ 9790186 (+)
CI01000027_09931428_09937694 NA coding downstream 356980 9929615 ~ 9937752 (+)
G143075 NA non-coding upstream 4116 9558122 ~ 9558380 (+)
G143066 NA non-coding upstream 84310 9476391 ~ 9478186 (+)
G143061 NA non-coding upstream 86886 9475009 ~ 9475610 (+)
G143064 NA non-coding upstream 87806 9474181 ~ 9474690 (+)
G143062 NA non-coding upstream 89557 9471169 ~ 9472939 (+)
G143093 NA non-coding downstream 20110 9592745 ~ 9593407 (+)
G143110 NA non-coding downstream 109891 9682526 ~ 9682767 (+)
G143034 NA non-coding downstream 128369 9701004 ~ 9710260 (+)
G143156 NA non-coding downstream 291996 9864631 ~ 9865105 (+)
G143159 NA non-coding downstream 324058 9896693 ~ 9898052 (+)
CI01000027_08255251_08264629 NA other upstream 1301670 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1530455 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1610554 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 2090782 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2604729 6951132 ~ 6957767 (+)
G143033 NA other downstream 156180 9728815 ~ 9729551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location