CI01000027_09767653_09768743


Basic Information

Item Value
gene id CI01000027_09767653_09768743
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9767653 ~ 9769402 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09767653_09768743.mRNA
CATGGCTTTAAATGTCTATTCACGGCTGACAAGAAGTTTTGTCCGCGTTTTAGCGAGCAGAAGTGTCATTCCTGTCACAAGACCTCTGACAACGAGTTCATGCTGGACACATTTACGTTGCTTACAGCCTCTTCTAGCCAGCCTTCAATAGATGTGTCATATGAGCAGCTGAAGAAACTGCTGGTGTCCCGATCCAGTGTGGTTATAGACGTCCGCGAGCCGTGGGAACTCAGGGAATACGGGAACATACAGGGATCAGTTAACGTTCCACTGGGACAATTGAACGGAGCTCTCCAGCTCAAACCTGATGAATTCAAGGAGAAATACGGAGGAGATATGCCATCACAATCCCAAAATATAGTGTTCACCTGCCTAGCTGGTGTAAGAAGCAAAACTGCCCTGGAAACTGCAGTGTCTTTAGGATACACCAATTTGATTTCAAAACAAAACTTTGAAAAGGATGACTTTTATATTTTCAGTCTAGAAATAAAAGAAAATGACTCTAAATATGGCATTTACAGCATCTGTTATACCTTACGGCAGGGGTCATCAAATGGGTATTCACCAATTAGTATTTGATTTGAAAGTAAATTTGGTAAAGAAAAAAAAATCAAAAGTATTAATCAAAATGCAATATTAAGCTAACTTCAACCAAAGCTGAAGTTCAGCTATTATCCCTCTTACATAAAAATGTATATTAAGTAACATTAAATTGTAATGTACATGATGTATATGATTCTGTACGTCAATAATGATTATTTTAATGCAGGGGTGCCCAAACGGTTTACTACGATGGGCCAAAAATCAAACTTGATTGAGGGCGTTAGGCTGAAAGTAAAGGTTGCATTTTATATTCTCTACATTTAAATAAGACAAAAAAGGTCAAACAAATAGATAAATTAGAAATGAAATGAAGATATGCTTCAATGGCATGTTTATTTACTATTTTTCTCCTCCTGATATGGCATGGAAGGCCAAATCAAAGGTCATCACAGGCCAAATTAGGTTTTGCCATCTCTGTTTTAATGATTTTTCAAATTATTACAAGTATGTAATAAGAATAACAATATTCTTATTACAAAAATGTACACTATGTAACTTTTGGCACTCTAGTGGTTAATAAGCAAAACTGCATGAGTCTTGTGGAAGAACATTGTATCCAGAGCTACTTCTCTCTGTTTATGTACATGACGAGTCACACAGGTACTCGCTCATTATATAAATTTTGTAAATTTTGA

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09767653_09768743.mRNA True 1238 mRNA 0.36 4 9767653 9769402

Neighbor

gene id symbol gene type direction distance location
CI01000027_09661837_09663114 POU3F2B, POU3F2 coding upstream 103796 9661523 ~ 9663857 (+)
CI01000027_09562530_09572606 NA coding upstream 195018 9562496 ~ 9572635 (+)
CI01000027_09484034_09501412 KLHL32 coding upstream 265398 9484034 ~ 9502255 (+)
CI01000027_09459448_09462994 NA coding upstream 304553 9459448 ~ 9463100 (+)
CI01000027_09448387_09455263 NA coding upstream 312360 9447047 ~ 9455293 (+)
CI01000027_09774092_09779035 NA coding downstream 4590 9773992 ~ 9779129 (+)
CI01000027_09783491_09789725 PRDM13 coding downstream 14089 9783491 ~ 9790186 (+)
CI01000027_09931428_09937694 NA coding downstream 160213 9929615 ~ 9937752 (+)
CI01000027_09958003_09959274 NA coding downstream 186423 9955825 ~ 9960262 (+)
CI01000027_10048220_10051640 NA coding downstream 278725 10048127 ~ 10051744 (+)
G143034 NA non-coding upstream 57393 9701004 ~ 9710260 (+)
G143110 NA non-coding upstream 84886 9682526 ~ 9682767 (+)
G143093 NA non-coding upstream 174246 9592745 ~ 9593407 (+)
G143075 NA non-coding upstream 209273 9558122 ~ 9558380 (+)
G143066 NA non-coding upstream 289467 9476391 ~ 9478186 (+)
G143156 NA non-coding downstream 95229 9864631 ~ 9865105 (+)
G143159 NA non-coding downstream 127291 9896693 ~ 9898052 (+)
G143205 NA non-coding downstream 242471 10011873 ~ 10013349 (+)
G143195 NA non-coding downstream 271504 10040906 ~ 10044074 (+)
G143230 NA non-coding downstream 321297 10090699 ~ 10090928 (+)
G143033 NA other upstream 38102 9728815 ~ 9729551 (+)
CI01000027_08255251_08264629 NA other upstream 1506827 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1735612 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1815711 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 2295939 7468964 ~ 7471999 (+)

Expression


Co-expression Network