CI01000027_09931428_09937694


Basic Information

Item Value
gene id CI01000027_09931428_09937694
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9929615 ~ 9937752 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09931428_09937694.mRNA
CTATAAATGAGATTGACAGCTACAAATTCTTGTACACTGATTATCAAAACATACAGTACGTGATGTTGGTTTTATAACGGCATTATTTTATATTGTTTGTTGCGTATTCACTTCTATCAAGGTTTGTCAAATCATATTATATTTTACACAGCAGCTCTAATCAATAACAGCCCTGGGGCATGATTCATGGAGCAGGAAATAGAAAACATGGAGTGGATCTAAAGCGGAATGACTGTGAATGTGATATTGATATTTAATAAAGAAGAAGTTAATGTTGAGCATCGTACCTTTTAGACACAACATTGCCACTTTGCTTTCTCACAGCCAAAGTGTTTCGTGTTTCGAAACGACTAAGTGAATGATTCAATGACCTGCTCATAAAGACAGTCCTTTGATTTGTTCCTGAATGAATCTGCGTTTTTGAACAAATCGGCTGGAATGAATTTCCATTCCGTTTAATGATTCACTCATACAGACAGCACTTGCCGCCACCTACTGGTGTATCGATGTAACATGTAGAAAGAGTATATTGTGTAAATTAGTATATTGTGTAAATTAGTTCAAATAACCTCAAAGGATTACAAAGAATGAATACATTTCTGTCATGAAAACTCTCGGAGTGTTTGGCATGGTAATGGGTATGACAATGTTGTATGTTTGGTCTTGGCGGAACAGATCTGCTACGCTGCTGCTGCCTTTATTGCTGCTGCTGCAGTGCAAGTACGGGACTTGCTACTGCCAATACATTCACGACACACTGCTGTGAGCAGGTAAGAGATGCTGCTGCTGTGCAATATAGTGTACATGAATTACCTGTAGCAGACCTATACAGGTGGAGCTGGGGAAGGTGGAGGGTTTCTGAAGCGCTGCAGTGCTAAGGCATTGCTACCAAAATATTTTGAAGGTTGAGCACGCAAGCTCATTGGCTACTGATACAGCAGGAACCAATCAGCTGAGCCCTATAAATAACGATGTGATTACGAGCAGATTGAGTTAAAAGACCTATTAACCTGTGTCATCTAGAGTTTCATGACAGAACTTTGTATTTGCACAAACTGGATAAATACTAAAAAAAAATAGAAAAATTCTATACTAAAAAATAGAAATAGAAATCATTTGGAGATCTCATCATATTGTGGGAGAACAATGCTTAGGCTATTGTATATAACTGTGCAAATCATAAGATGGGTTAATTATTTGGCATGAGGCACTTTAAAAAAAAAAAATTCTGGGAACTATTTTAACAACACTAAATCAAATCAAATATATTTTATCAGGTTAATATCTTCTTGATAAGAAGTCTGGTAAACATGTCTACCTATTGTTAGCTGAACATTTACACATGGAAAAATCCAGCTATGGCAAACTACTTGCTATTGTGGTCACCAAAACAATCATTGTCATCTGATTTTATTGACCAAAAAAAATTTGTGAAAATGTGTTAGTGTTCAAACGCATAGTATACACATAGGATTAAAACTGCCTTCTGTACATATTATGGTAAAAATGTATTCTAATATCTGAGGCTAATCATTTCCAAGCTAAATTATACTAATGAATTGCATCATGTCTCAGTTAGAAATACTGTTCTGCTGAAACACTGTCTGGAACTTTGCAATTTGTCAAAGGGAAAAATGTGAAGGCCAAATGAGCAGGGAGATCAGAAGGCTGTTCTATGCATGCATGCTTGTGTATGTATGTGTGTAGAGGAGTTGGATAAGGGTGACTGGCACTTAATCTCTCTGTGAACAGTAGAGCACTTTCCTCATTTAACCACTTCACTCACATAGCACTGGAATGCTTTACCGCTACCATGTGGGTGGTCAGTCTCCTCTCCTATATGCACCTGGGCACACCTGGGCTGCCATACATCTATACACACTACTGGAGCCCACCTAGAAAGAGAGACCTCTTTCTCCTCACTCTCGTCTCTTACTGTGCAAAGCTTCCCACAAACACAAGGATAATATCCTGCCTGCACTTCAGGCAGACACAGGGAAGGGCTGTTGAGAAGGGAGGAGGCACAGTAAAAGAGACATGGAGTGACCATCCACCTGCTCTCAGCATTAATCCATCCACACACAAACACACACAGTCACATTGGTGCCGTGACCCAGATAAAACAAATACCTGGGACAAACAGGACCAAAGGATGCACGGGAAACTGACGCAAAGGGTTCAGGAGGACATAAAGTCTACCTTAATGAAAACAAAAGTGCAGAGTGCAGGCACACGCAGCGGAAGACTGAAGAACAGAAGTCCAAAAAGAAATTAACCAAAGGTCAGGGACAGTGAGATACAACTGAGGATCAAACAGTGACAGATAAACTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09931428_09937694.mRNA True 2333 mRNA 0.39 4 9929615 9937752

Neighbor

gene id symbol gene type direction distance location
CI01000027_09783491_09789725 PRDM13 coding upstream 139429 9783491 ~ 9790186 (+)
CI01000027_09774092_09779035 NA coding upstream 150486 9773992 ~ 9779129 (+)
CI01000027_09767653_09768743 NA coding upstream 160213 9767653 ~ 9769402 (+)
CI01000027_09661837_09663114 POU3F2B, POU3F2 coding upstream 265758 9661523 ~ 9663857 (+)
CI01000027_09562530_09572606 NA coding upstream 356980 9562496 ~ 9572635 (+)
CI01000027_09958003_09959274 NA coding downstream 18073 9955825 ~ 9960262 (+)
CI01000027_10048220_10051640 NA coding downstream 110375 10048127 ~ 10051744 (+)
CI01000027_10055186_10067131 AKIRIN1 coding downstream 117434 10055186 ~ 10067131 (+)
CI01000027_10072946_10084310 RHBDL2 coding downstream 134685 10072437 ~ 10084566 (+)
CI01000027_10090545_10093306 CX55.5 coding downstream 152793 10090545 ~ 10093746 (+)
G143159 NA non-coding upstream 31563 9896693 ~ 9898052 (+)
G143156 NA non-coding upstream 64510 9864631 ~ 9865105 (+)
G143034 NA non-coding upstream 219355 9701004 ~ 9710260 (+)
G143110 NA non-coding upstream 246848 9682526 ~ 9682767 (+)
G143093 NA non-coding upstream 336208 9592745 ~ 9593407 (+)
G143205 NA non-coding downstream 74121 10011873 ~ 10013349 (+)
G143195 NA non-coding downstream 103154 10040906 ~ 10044074 (+)
G143230 NA non-coding downstream 152947 10090699 ~ 10090928 (+)
G143237 NA non-coding downstream 169644 10107396 ~ 10107823 (+)
G143240 NA non-coding downstream 170715 10108467 ~ 10108834 (+)
G143033 NA other upstream 200064 9728815 ~ 9729551 (+)
CI01000027_08255251_08264629 NA other upstream 1668789 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1897574 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1977673 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 2457901 7468964 ~ 7471999 (+)

Expression


Co-expression Network