G138030


Basic Information

Item Value
gene id G138030
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 39146 ~ 100257 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU156795
ACTATACAATTGAAATTTGTAAACCTTCAAAAATCTTTAATTTTTTTTTTTTGAGTGTACTAAGTCATAATTATGGATTTTACTATACAGTTTAAATTAGTAAATCTTAAAAAAAAAAGGCTTAAAAAGTGTATTAAGTCATAATTATAAGAAGAAAACTGACATAAAGCATGATTATTTTCTTATGTGCGATAATCCACAACTGTTGAGCTCCACAAAAGCATCAAAGAAGCAGTACATAAATATATTATTTTGCCCAGTATGTGCGTACAGTATATTTTATGCTGATTAGAATATTGCATCGTTATTTAACCACAAGATAAATGAATAAATTATCCATTGAATGTCTTATGCAACAAATGGTGATTAAATGATGACAGAATCATGATTTAGGGTGAATTATTGCTTTTAAAAGAGGCAGATGGTATAACAAGCTTGAGTTTCTGTCAAGTTGGGCTTCGGTTCACTTTTACATCGAGACAAGCTGCTATAGCAAATGTTTTCAACATTGCTCTAAGAGGCAATGAAGCATCACAAGTGATTTTGTTTAAGAAAGAAGACACCAGAAGGATGAGATATGCTCACCAACAGATAATTTCCCTGTTTTAATTAGCAGACGACTAAGTGGCCGTTCAAACAGGACCTTCTTCTTGTGTTAAAAACAGCGGAGCGCAACAGAAGGTGTGTTTATAGGCACATTAACTCACTGACACCTGCTAATGTTCACCTCAAGATGTTCATTCTGACTCCTGATCCAGATCCCATTCATGTTTTAAAACTGACACTGATTTGTTGAACTAATTCATCAAGATGAAATCAAAGTAGAGAGGGCGGTTCGAACAGGAGGGGTTACATTGGTGCCGTGACCCGGATGGGAGTGAGGTTTAGGGGGGTGTAACGGAGGTCAGTAAGAGCTGTGCGTGTAAACCTCACTTCCCTGGCCTCAAGAGACGCACTAGCAACTGATGCTAGAGACTGCGGTCTTTAGCGTCCTTGTTAGCGAGCCCGCCTCCCATGCCAGAGACCCTGGTTCGAATCCCGCTCAGAGTGGGTCAAATAGGACCAGTGACACATTTACTGAAAATAGCAAGAGAGAGATGTGGCACATGTGTGCATAGACCAAAATTAAAATAATAAATGGTTAAAACTGAAGTTTTTATAATATTTCACTGCACAGAGTTTCCATTATGAAAATTGCATTTTCAGAGGGAGGCGAAATGAGTGAAACTTCATGGTGTTACAGACCGCCATCAATTTTCAATTTGCATAAGAAAATAAATGGATACGTGGATAATCCATAACAGACGGTTGTGATGGGATAGAGGGGTTATTTCATGACAATGATATTATTACCATGATCATCTGGGATGTTTCGGATTTAAAGTGAACAACAGAAAATGAGGACGGTTCGAAGGGATAATAATGGGGTTATGGGTTCACACGGTTCTTCGGCTTTTATTAATGAGGTGAACGTCTTGTATTTCAGACATCACATCCCATAATCCAACTCAATCACAAGACTATGGTTTCAGATAGAAAGCATTATCCTGTCTGACTCACGGTTTAGGTTTTGCATAGACAGTGTTATTAAAAAAAGAACAAAAAGTATGTGTTAAAGAAAAAATACTCATTGTCATATTATCTCTGAATCCGCCACTTTTTCCATCAGCTTTCTGTTAGTCAACGCAAAATCTGCGCAGCGAAAATCTTGATTGCATGGATTCTATTGAAATTACTGAAATTACTAAAACAGTAAAACCTAGTTCACACCAAGAACGATAACTATAACGATAACTATATTTTTGTCCACACAGACGAACGATAATGGTCTGTTTATTCTGCAGTTTCAAAGTGTGTACAACATGTTTTTGCTGTTATTGTTGCATTTACATGCTTTAACCAGCTGATGTTCTCAGCATGCTATGTTTGGAGTGAATAGCTAGTGTAATCGATCTAATCTAACAGCTAATTTAGCTGACGAAGTCAATATAGTGGAATAAAAACAACGGCTAGTCTTTTTCACTGCAGCTTCAAAGGAAGCAAGACAATGTTGTCCAAACTAGCGTTGGATACCTGAGCTAATTTTATTTTACACTGTTTGCTAGCCTGCCATAATGATCTCAGCGTTAATACTTCTCACCATTTATTCTGAAGGTATGACTGATTGCTTTCCATATATCCATTTTCTTTAAAGTATCCTTGAAAATGGGGTTTGACTTGTCAAACAGTGGTGGATTTTTCAGGACTTCTGCGATTAACTTGATGTCCGCCATTTTAAATGCGCAAGCCCTTAAATTAGAACGGATTCCAATTGGCTGTCAGTGTTTTATCATTCAACAGCTGGAAAAAATCATTCTGAAAGTGATCCCAACGATATTGTTTATCTATATCATTATTGTTATAGTCGTGGTGTGGACAGTGCTATTCTTTTATATTTAAAACGATTTTTAGAACTATATTTTTATCGTTATCTTTATAGTTATTGTTCTTGTTGTGAAGGGCCTTTAGTCTCACTTAAAATGTCATTGCATTAGTTAAAATATAAAACATTTACTTGAGAAGAAAGAGAGCGCAAGCACACTTTACAAGAAAAAACATTGCACAAATAGTTCAAAACCACTTTCTGGTTGTCAAATGTTAGCAAGATGAATCAAAGAATGTGCATTAAGGTTGGCATTTAGGGTTGCCAGGTTTGCGTAACAAAACTATTGCTATTCAAAACCCAGCCAATTTACAGCCAAAACTAGCCCAAAATCGCATTCTGGGGGGTTCCCCAGTAAAAAAAAATTAGTTCCCGCGATGGGGGAGGGGTCACTTCAACCTGCGGCAACAGTGTAAAAGTAGCCCAATGCCGCAGGAAAACCGCGGACTTGGCAACTCTGTTGGCATTAAAGGCTATTGTGACGTATATGCGAGTGAAATGCTTCTCGAACAAGAACAAATGTAGGGCGGGGCTTGATTTTGTCTGTGGGGAATTGATTGGATGGTTGTGGTTTGCTATTGGTGGATCTCATGTGAGTGACAGGTTGCCCCACCCTCATCATTAGAGAAGAGAAATCACTGCAAGAGTTATTTTGACTCAAGATTACGAGGCACATGAAATTAAAACAATACTTTTAAAACAGATAAATCATTTATAATAAATACTAAAATATTCCATTTAAAAATAAGAATCAATTTTGATATTACAGTGACTTTAATAAAGTGAATCTCATTTTGATTTCATGTTAACTTTTGTGCATCACCTGAGCTGTGTGTGTATTTTCCATCAAGTCAGCATTGTTGCGTCGGCGTCTGGTTGTATTTATAATCTGGGTTTGCAGTGTCAGGGTTTTTCCAGCATGTGGTCTTCAGGGAGGGCGTGTGTGCGGGTCTGCATTAGCTCTAATGGCCAGAGGGGTCACGTTTAAAATCATAATGGCTTTTCCGCTCCCTCCTGCTGGGAGACACGTCTCCAACGCAGCCTCATCAGAAAGGACGTCCGCCCAATAAAAGATGCCGGCTTCAATCTCTCCGCATACGCTTTTAAAGAAATTCATTTTGCACTTCCTTCGTTTCCTTGCTTCTTAGACGATGGCGGTCGCTTCTTTTCAGAGCGCTTTCTGACATGTTGTCATTATAATTGTGCTTTGTCACTGCAATGCTGTTGTTTCGTTTTAATACATGGGAAAGACAGATTCAGCCAGAGACAAAGACATTCTGTTTTTATTTTCAACACACACTCTTAGAAGAAAAGGTTCTATATAGAAGCTTAAAGGGTTCCGTCAGGCACTTCATGATATATAGAACCATTTAGGGGTTCCATCAGGGATCATTTTATGGATTCGTTTAATTAGTAGTCGTAGACACCTATTGTAATCATTGGGGTTCTTATTATTCTTCTTCCGTTTCCACTTTTGAGTCCATGGCAGCCCATAGAACCGCTTGCGGGAAAGTTATGAAATTTGGCACACTGATAGAGGCCAGTTTGAACTGTGTCCATAACAAATTTGGAGTCTCTAACTCAAACCCTCTAGCGCCACCAGCACTCACATTTATGCTAAAAACTTTTGAACCGTAAGCACTCTATGATGTCATTTTCCGCCATTTTTCCGCCATTTTGAATTTTCCAAAAAAACTACTTTTTCGAACTCCTCCTAGGCCGTTACTCCGATTTTCACGAAAATTGAATCAGATCATCTTCAGACCATGCGGAATTCAAGTCGATTTGTCGAACCGTTTTCGAAAAGCACGCAAACGAATTTTAAGTAGTGCTTGCGGAAATAGACGTAAGGCTTTATCTCCTCAACCCTTTATTGTATTCAGACCAAACATGGTCCATGTCATCACAAGCATGACCGGAGGTAACATGTAAAAAAGTTATAATGAAATTTCGGCACAGCGCCACCTACTGGTCCGGAGATATGAAATATTGCTCTTTTTGCTTATAACTTCTGAACGGTTTGTCCAAAAATCATAAAAGTGGTCTCGTTAGAATTGGGGCATCAAGCTGAGTCGAACGACATCCAACTTTTCCATATCGGCCAATTTGCGCGTTAGCCATTTTGAATTTTGGCATAAAATGCTGTATTTTATGAACGCATTACCTCTCCTGCCTGGATGTGGCCGGTGGTCGGCGTGGCGACTGGACTCGGTGTGGCGCTTGTCGTGATCGTCCCGGTGGTGCTGATGTGGTTAAAGAGAAGACGACAGCGGCGGGAGGGAGGCGAGCGAGTGCGTCACAGGTCCACCGTCACTGAAAGCAATAATGGCAGCAAGGCCTGGACCCGCCGCTCTGAGGAGAAAAGAAGCCGATCAGGAAGAGATAAAGATAGAAATGGGATGAAGAAAAACAAGAAAGGAAAGGAATCAGGAAAAAGACGTAAGGAGCCCCTCGGCGAGGATGCTATCCGTATGCGGCCCCTGAGGAAGGAACTAGACATTGGAAGTGACACCGACGTGACCCAGAGCTCCATGGAGGACATCAATAAGACGATCTGTGACCACAGATCACCAGACCAAAAACACTTCCAACAGCCCCGCATGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156795 True 5029 TUCP 0.40 5 39146 100257

Neighbor

gene id symbol gene type direction distance location
CI01000027_00000579_00037786 NA coding upstream 1294 579 ~ 37852 (+)
CI01000027_00122108_00124986 NA coding downstream 21767 122024 ~ 124986 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding downstream 128748 229005 ~ 237759 (+)
CI01000027_00238851_00240657 NA coding downstream 138594 238851 ~ 240991 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 149499 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 264733 364990 ~ 371996 (+)
G138060 NA non-coding downstream 7867 108124 ~ 109084 (+)
G138068 NA non-coding downstream 11087 111344 ~ 113090 (+)
G138077 NA non-coding downstream 52031 152288 ~ 152795 (+)
G138090 NA non-coding downstream 85793 186050 ~ 186273 (+)
G138093 NA non-coding downstream 90923 191180 ~ 191429 (+)
CI01000027_00391159_00499309 CSMD3 other downstream 318037 390683 ~ 499760 (+)
G138238 NA other downstream 729517 829774 ~ 831683 (+)
G138247 NA other downstream 755131 855388 ~ 893121 (+)
G138290 NA other downstream 895713 995970 ~ 999181 (+)
G138436 NA other downstream 1406704 1506961 ~ 1507816 (+)

Expression


Co-expression Network