Item | Value |
---|---|
gene id | G138029 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000027 |
NCBI id | null |
chromosome length | 10680226 |
location | 77537 ~ 78865 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU156794 | True | 941 | lncRNA | 0.34 | 2 | 77537 | 78865 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000027_00000579_00037786 | NA | coding | upstream | 39685 | 579 ~ 37852 (+) |
CI01000027_00089337_00092919 | NA | coding | downstream | 9914 | 88779 ~ 93085 (+) |
CI01000027_00122108_00124986 | NA | coding | downstream | 43159 | 122024 ~ 124986 (+) |
CI01000027_00229612_00237058 | RAD21A, RAD21B, RAD21 | coding | downstream | 150140 | 229005 ~ 237759 (+) |
CI01000027_00238851_00240657 | NA | coding | downstream | 159986 | 238851 ~ 240991 (+) |
CI01000027_00250077_00273130 | EIF3H | coding | downstream | 170891 | 249756 ~ 273130 (+) |
G138062 | NA | non-coding | downstream | 8627 | 87492 ~ 88612 (+) |
G138060 | NA | non-coding | downstream | 29259 | 108124 ~ 109084 (+) |
G138068 | NA | non-coding | downstream | 32479 | 111344 ~ 113090 (+) |
G138077 | NA | non-coding | downstream | 73423 | 152288 ~ 152795 (+) |
G138090 | NA | non-coding | downstream | 107185 | 186050 ~ 186273 (+) |
G138057 | NA | other | downstream | 14694 | 93559 ~ 96727 (+) |
CI01000027_00391159_00499309 | CSMD3 | other | downstream | 339429 | 390683 ~ 499760 (+) |
G138238 | NA | other | downstream | 750909 | 829774 ~ 831683 (+) |
G138247 | NA | other | downstream | 776523 | 855388 ~ 893121 (+) |