G138090


Basic Information

Item Value
gene id G138090
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 186050 ~ 186273 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU156869
AACAAACTGAAAATTGACCAAACAAAGTTAAGAGAATCTAAAAATCTGAATGCATCAGATTTAAGTTTTCACAACAATTCCTTTTTAACAGCATGAAACCATCGATCAGTGATGTTCTCACAGATCTAAAGGTCAAACGACAACAACAAGCCAAAATAACAAAACAACCAACTAGAACTCCATAGTCACACCTTGCAAATAACCAAAATACATAAAGCACTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156869 True 224 lncRNA 0.33 1 186050 186273

Neighbor

gene id symbol gene type direction distance location
CI01000027_00122108_00124986 NA coding upstream 61064 122024 ~ 124986 (+)
CI01000027_00089337_00092919 NA coding upstream 92965 88779 ~ 93085 (+)
CI01000027_00000579_00037786 NA coding upstream 148198 579 ~ 37852 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding downstream 42732 229005 ~ 237759 (+)
CI01000027_00238851_00240657 NA coding downstream 52578 238851 ~ 240991 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 63483 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 178717 364990 ~ 371996 (+)
CI01000027_00391159_00499309 CSMD3 coding downstream 204410 390683 ~ 499760 (+)
G138077 NA non-coding upstream 33255 152288 ~ 152795 (+)
G138068 NA non-coding upstream 72960 111344 ~ 113090 (+)
G138060 NA non-coding upstream 76966 108124 ~ 109084 (+)
G138062 NA non-coding upstream 97438 87492 ~ 88612 (+)
G138029 NA non-coding upstream 107185 77537 ~ 78865 (+)
G138093 NA non-coding downstream 4907 191180 ~ 191429 (+)
G138094 NA non-coding downstream 10504 196777 ~ 197714 (+)
G138104 NA non-coding downstream 30015 216288 ~ 217000 (+)
G138106 NA non-coding downstream 31850 218123 ~ 218344 (+)
G138107 NA non-coding downstream 32114 218387 ~ 218630 (+)
G138030 NA other upstream 85793 39146 ~ 100257 (+)
G138238 NA other downstream 643501 829774 ~ 831683 (+)
G138247 NA other downstream 669115 855388 ~ 893121 (+)
G138290 NA other downstream 809697 995970 ~ 999181 (+)
G138436 NA other downstream 1320688 1506961 ~ 1507816 (+)

Expression


Co-expression Network