G138115


Basic Information

Item Value
gene id G138115
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 245883 ~ 247582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU156899
TTTTTAGTGTGTGAACCAAATTTTCATGACATTTGAGTTAAGGATTTAAGCATGATGTTCCGTATTTGTAAGCACTATAAAGATGTCAAATTTGTAAATTATTTTATTGTCATTTACTATATCATGAAGTTTCCACAGCAGACATGACCTAAGTGTGTGTAATCAGCTGTTGAATTAACGAATCCTACTTATTGTCAAAGTTTTTTCCGTTTATTAATCTATTGGACTGGAAGCTTTTCTGAAGGTCAAGACAGAAATTAATATTCATGCACTAAACTTTAATGTTAGGTGGTACATGAAACTGAACGCAGGGTTCTTGGGGCGCGTTTTAAAAGATTCAGCTGAATAATTTTCCACATTTGCACGCTGCCATTTTCACTTTCAAGTACAAGAGCGCTCGATTACCGTCAGTCGATATTTTGGTACGTTCTGTCCATTTTGAGGAGAAAATATAAGAGTTCAAGAACCGTTAATGGAACGAAATCATTCCCAGAACCCTATAGGAGTGATTTGAGGTTGGAATTGGATTGGCCGCTCTTATCTGCTGAAGGAACAGTAAATATGTGACTTCCGTCTCGCCTGCGCAGCATCCGAACGCTCTAAATGCTTCTCCGTGTGAAATTACAGATGTACTGATGCACTTTAGTTCCCCATCAGTTATTGGCGATACGAAATGCTGTGTCCCTTCTGAGAAACACGACCGTATCCCATCATGCCTTGGGCGAGTGAGCTGGCTCTCTCAAGATGTGTTCTTGCTTCTGTAGAAATGAAAAAACCCCAGTGGATTGGCATTCAGAGAGGCTGTTCAGACAGCGTAATTAGACAGTGAGTGTATTTGTTCTTCCATTAACCCCAGGTCTTTCTCCATGTTTACTGCTCTGAGTGGTCGCAAAGTACCATGTTAAGATGGAGGAGCAATCTTGCTTTTAGCCCTTCCAACTTGTGTTTTAAAGCACTGGGAATGCAGACAGATTGATATTTTCCATCTCTGCCAATCTGGAGATTGAAGTTTGCACATATAATAATCTCCTGAGACTCGTCTAAAGCACATGGGCGAACGTAAGCCTGGTATTAACGTCCGGTAGAGATGGATCGCTGTTTACTGCATCTTAATTACAGGCAAAAATCTGAATATTGTTTTTAGAAATATGTCTGGTCAAGACACCACAGCTTTTGTTTGTTTTCATGCACAGATCAATTTTGCTTTTTTACTTTCATAACATGTCGTCTTTCAGACTAATTGAAAGAAAACATCCAAAATACACTGTGTATTACATTTTATCTGTTTGCATCTGTAGATTTCAATTACAATGCAAGGCCGTTTCTCAAAATGAGTTAGTCTTGTCAATATTCTGAAGGTTTGTTTGTTTCCTTCACCTGTTTTATAGAACATTTATTCTTTAAAACATGCAGATTTTCCCCCCTGGCTGTTGACAGTATTTTCTGATTTATGGAGTGATAAAAATCCAAAATCCTCTCTATAAAAACCTTTAATATGTAGAGATGTACTGATGTATCGGCCAATAATTGGTATCTGCGGATAAAATGAATTATTTTCATTTTGTCTATCCTTAGGGGACTTTCTCATACTGTGTGTGAAGAAAATGTCTTGTTGAATTTAGGGCTGTCAAAGTTAAAGGGTTAGTTCACCCAAAAAATGAAAATTCTGTCATTAATTACTCACGCTCATGCCGTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156899 True 1700 lncRNA 0.38 1 245883 247582

Neighbor

gene id symbol gene type direction distance location
CI01000027_00238851_00240657 NA coding upstream 4892 238851 ~ 240991 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding upstream 8124 229005 ~ 237759 (+)
CI01000027_00122108_00124986 NA coding upstream 120897 122024 ~ 124986 (+)
CI01000027_00089337_00092919 NA coding upstream 152798 88779 ~ 93085 (+)
CI01000027_00000579_00037786 NA coding upstream 208031 579 ~ 37852 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 2174 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 117408 364990 ~ 371996 (+)
CI01000027_00391159_00499309 CSMD3 coding downstream 143101 390683 ~ 499760 (+)
CI01000027_00505199_00523652 NA coding downstream 256688 504270 ~ 523652 (+)
CI01000027_00527282_00534071 NA coding downstream 279285 526867 ~ 535055 (+)
G138114 NA non-coding upstream 575 244016 ~ 245308 (+)
G138107 NA non-coding upstream 27253 218387 ~ 218630 (+)
G138106 NA non-coding upstream 27539 218123 ~ 218344 (+)
G138104 NA non-coding upstream 28883 216288 ~ 217000 (+)
G138155 NA non-coding downstream 396039 643621 ~ 645451 (+)
CI01000027_00681087_00701456 NA non-coding downstream 402607 681087 ~ 701956 (+)
G138207 NA non-coding downstream 426069 673651 ~ 718459 (+)
G138229 NA non-coding downstream 562075 809657 ~ 809941 (+)
G138233 NA non-coding downstream 566999 814581 ~ 814806 (+)
G138030 NA other upstream 145626 39146 ~ 100257 (+)
G138238 NA other downstream 582192 829774 ~ 831683 (+)
G138247 NA other downstream 607806 855388 ~ 893121 (+)
G138290 NA other downstream 748388 995970 ~ 999181 (+)
G138436 NA other downstream 1259379 1506961 ~ 1507816 (+)

Expression


Co-expression Network