Gene
RNA
| Item | Value |
|---|---|
| gene id | G139168 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 257582 ~ 257809 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU158150 | True | 228 | lncRNA | 0.32 | 1 | 257582 | 257809 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_00178291_00179467 | EXT1B, EXT1A, EXT1, EXTL1 | coding | downstream | 78115 | 178289 ~ 179471 (-) |
| CI01000027_00137910_00141799 | NA | coding | downstream | 114305 | 137292 ~ 144599 (-) |
| CI01000027_00131884_00132650 | NA | coding | downstream | 124932 | 131395 ~ 132650 (-) |
| CI01000027_00108990_00118237 | NA | coding | downstream | 139174 | 108119 ~ 118408 (-) |
| CI01000027_00078634_00087807 | TAP1 | coding | downstream | 168863 | 78492 ~ 88719 (-) |
| CI01000027_00332200_00343377 | NA | coding | upstream | 74173 | 331982 ~ 344039 (-) |
| CI01000027_00645077_00650763 | SLC25A32B, SLC25A32 | coding | upstream | 387185 | 644241 ~ 651285 (-) |
| CI01000027_00701871_00719591 | COL28A1B | coding | upstream | 443957 | 701766 ~ 719591 (-) |
| CI01000027_00742700_00758723 | COL28A1B | coding | upstream | 484822 | 742631 ~ 758723 (-) |
| CI01000027_00798826_00806532 | ICA1 | coding | upstream | 540877 | 798686 ~ 806532 (-) |
| G139167 | NA | non-coding | downstream | 2978 | 254370 ~ 254604 (-) |
| G139160 | NA | non-coding | downstream | 8194 | 249123 ~ 249388 (-) |
| G139158 | NA | non-coding | downstream | 16456 | 240844 ~ 241126 (-) |
| G139155 | NA | non-coding | downstream | 17906 | 239440 ~ 239676 (-) |
| G139154 | NA | non-coding | downstream | 18186 | 238673 ~ 239396 (-) |
| G139166 | NA | non-coding | upstream | 3591 | 261400 ~ 613635 (-) |
| G139215 | NA | non-coding | upstream | 186069 | 443878 ~ 454608 (-) |
| G139217 | NA | non-coding | upstream | 202762 | 460571 ~ 461558 (-) |
| G139219 | NA | non-coding | upstream | 216637 | 474446 ~ 477358 (-) |
| G139117 | NA | other | downstream | 20003 | 234212 ~ 237579 (-) |
| CI01000027_01241417_01245177 | NA | other | upstream | 986826 | 1240478 ~ 1246267 (-) |
| CI01000027_01303308_01319462 | NR2F5, NR2F1, NR2F1.L, NR2F2 | other | upstream | 1044225 | 1302034 ~ 1321178 (-) |
| CI01000027_02119227_02124423 | NA | other | upstream | 1864321 | 2119131 ~ 2125142 (-) |
| CI01000027_02226447_02227499 | NA | other | upstream | 1968816 | 2225781 ~ 2227499 (-) |
| G140118 | NA | other | upstream | 3243725 | 3509352 ~ 3584679 (-) |
