G138229


Basic Information

Item Value
gene id G138229
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 809657 ~ 809941 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157034
AAAGACTTTCAAATCACATGAGCAATTCACAATAGAATATAGATAACATAACAAATGTTTAAACGAAGAAATTTTACAGTTTTATCCACTAAATGAGCTCATTTCAAATTTGATGCCTGCTACAGGTCTCAAAAAAGTTGGCACGGGGGCAACAAATGGCTGAAAAAGCAAGAAATTTTGAAAAGATTCAGCTGGGAGAACATCTAGCAACTAATTAATTTAATTGATATCAGGTCTGTAACATGATTAGCTATAAAAGGGATGTCTTAGAGAGGCAGAGTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157034 True 285 lncRNA 0.34 1 809657 809941

Neighbor

gene id symbol gene type direction distance location
CI01000027_00779517_00795032 NA coding upstream 14268 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 32894 765467 ~ 776763 (+)
CI01000027_00738809_00739296 NA coding upstream 69263 738004 ~ 740394 (+)
CI01000027_00681087_00701456 NA coding upstream 108110 681087 ~ 701956 (+)
CI01000027_00637372_00642483 CTHRC1B, CTHRC1, CTHRC1A coding upstream 167015 637372 ~ 642642 (+)
CI01000027_00909268_00918831 NA coding downstream 98572 908513 ~ 919213 (+)
CI01000027_00949578_00953698 NA coding downstream 138780 948721 ~ 954281 (+)
CI01000027_00980123_00987611 NA coding downstream 169214 979155 ~ 987884 (+)
CI01000027_01033975_01037549 NA coding downstream 222962 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 233451 1043392 ~ 1050863 (+)
G138207 NA non-coding upstream 91198 673651 ~ 718459 (+)
G138155 NA non-coding upstream 164206 643621 ~ 645451 (+)
G138115 NA non-coding upstream 562075 245883 ~ 247582 (+)
G138114 NA non-coding upstream 564349 244016 ~ 245308 (+)
G138233 NA non-coding downstream 4640 814581 ~ 814806 (+)
G138234 NA non-coding downstream 6053 815994 ~ 821269 (+)
G138247 NA non-coding downstream 49401 855388 ~ 893121 (+)
G138267 NA non-coding downstream 123802 933743 ~ 934498 (+)
G138277 NA non-coding downstream 159000 968941 ~ 969167 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 380981 390683 ~ 499760 (+)
G138030 NA other upstream 709400 39146 ~ 100257 (+)
G138238 NA other downstream 19833 829774 ~ 831683 (+)
G138290 NA other downstream 186029 995970 ~ 999181 (+)
G138436 NA other downstream 697020 1506961 ~ 1507816 (+)
G138515 NA other downstream 854467 1664408 ~ 1676860 (+)

Expression


Co-expression Network