G138233


Basic Information

Item Value
gene id G138233
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 814581 ~ 814806 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157038
GTTACATTTATTAATAATAATCAAAGCTTGCAAGTAATATAGTTCTAACTATAAAACATATGGTCATTGATCACAGAATTTAAAGTCTGAAAAAATGGATTTACCAAGGAATTTTTTCCTTTAATATCAAGAAATTCTGTGGAAATTTCAGGTTCAATTTCAGCATTTGATATTGATAATAATACCAGCGTCCACATACTTCCAGTCCTTCCTTCATAAAGCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157038 True 226 lncRNA 0.29 1 814581 814806

Neighbor

gene id symbol gene type direction distance location
CI01000027_00779517_00795032 NA coding upstream 19192 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 37818 765467 ~ 776763 (+)
CI01000027_00738809_00739296 NA coding upstream 74187 738004 ~ 740394 (+)
CI01000027_00681087_00701456 NA coding upstream 113034 681087 ~ 701956 (+)
CI01000027_00637372_00642483 CTHRC1B, CTHRC1, CTHRC1A coding upstream 171939 637372 ~ 642642 (+)
CI01000027_00909268_00918831 NA coding downstream 93707 908513 ~ 919213 (+)
CI01000027_00949578_00953698 NA coding downstream 133915 948721 ~ 954281 (+)
CI01000027_00980123_00987611 NA coding downstream 164349 979155 ~ 987884 (+)
CI01000027_01033975_01037549 NA coding downstream 218097 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 228586 1043392 ~ 1050863 (+)
G138229 NA non-coding upstream 4640 809657 ~ 809941 (+)
G138207 NA non-coding upstream 96122 673651 ~ 718459 (+)
G138155 NA non-coding upstream 169130 643621 ~ 645451 (+)
G138115 NA non-coding upstream 566999 245883 ~ 247582 (+)
G138234 NA non-coding downstream 1188 815994 ~ 821269 (+)
G138247 NA non-coding downstream 44536 855388 ~ 893121 (+)
G138267 NA non-coding downstream 118937 933743 ~ 934498 (+)
G138277 NA non-coding downstream 154135 968941 ~ 969167 (+)
G138300 NA non-coding downstream 169651 984457 ~ 984699 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 385905 390683 ~ 499760 (+)
G138030 NA other upstream 714324 39146 ~ 100257 (+)
G138238 NA other downstream 14968 829774 ~ 831683 (+)
G138290 NA other downstream 181164 995970 ~ 999181 (+)
G138436 NA other downstream 692155 1506961 ~ 1507816 (+)
G138515 NA other downstream 849602 1664408 ~ 1676860 (+)

Expression


Co-expression Network