G138300


Basic Information

Item Value
gene id G138300
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 984457 ~ 984699 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157127
TGAATTCGGACACTGAGTGCACCGGAGGGGCTGCCGCTTTTGCATAGTTTGTGCCTGCTGTTTAACATTTTAGCAAACTGGCAGCCCCAGTAGTAAGATGAAAAGATTAATGTTGAACTCTGTCATGGAAACTAGCATGCATAATCCGTAATTAAACAATTTAATAATCAATTAAAAAGGAATTTATACCTGTATAAATATCATTCTGTAGCCACATTGGATCAGCGGTTTGGAAAATGTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157127 True 243 lncRNA 0.38 1 984457 984699

Neighbor

gene id symbol gene type direction distance location
CI01000027_00949578_00953698 NA coding upstream 30176 948721 ~ 954281 (+)
CI01000027_00909268_00918831 NA coding upstream 65244 908513 ~ 919213 (+)
CI01000027_00779517_00795032 NA coding upstream 189068 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 207694 765467 ~ 776763 (+)
CI01000027_00738809_00739296 NA coding upstream 244063 738004 ~ 740394 (+)
CI01000027_01033975_01037549 NA coding downstream 48204 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 58693 1043392 ~ 1050863 (+)
CI01000027_01089832_01104918 NA coding downstream 105133 1089832 ~ 1104980 (+)
CI01000027_01119958_01123077 NA coding downstream 134731 1119430 ~ 1123099 (+)
CI01000027_01134221_01143363 NA coding downstream 147458 1132157 ~ 1143526 (+)
G138277 NA non-coding upstream 15290 968941 ~ 969167 (+)
G138267 NA non-coding upstream 49959 933743 ~ 934498 (+)
G138247 NA non-coding upstream 91336 855388 ~ 893121 (+)
G138234 NA non-coding upstream 163188 815994 ~ 821269 (+)
G138233 NA non-coding upstream 169651 814581 ~ 814806 (+)
G138309 NA non-coding downstream 19294 1003993 ~ 1004346 (+)
G138311 NA non-coding downstream 28178 1012877 ~ 1013154 (+)
G138312 NA non-coding downstream 30345 1015044 ~ 1015245 (+)
G138289 NA non-coding downstream 36822 1021521 ~ 1024940 (+)
CI01000027_01176638_01185141 NA non-coding downstream 195211 1175836 ~ 1185307 (+)
G138238 NA other upstream 152774 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 555781 390683 ~ 499760 (+)
G138057 NA other upstream 887730 93559 ~ 96727 (+)
CI01000027_00089337_00092919 NA other upstream 894580 88779 ~ 93085 (+)
G138290 NA other downstream 11271 995970 ~ 999181 (+)
G138436 NA other downstream 522262 1506961 ~ 1507816 (+)
G138515 NA other downstream 679709 1664408 ~ 1676860 (+)
G138915 NA other downstream 2499688 3484387 ~ 3486647 (+)
G138953 NA other downstream 2517373 3502072 ~ 3520065 (+)

Expression


Co-expression Network