G138290


Basic Information

Item Value
gene id G138290
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 995970 ~ 999181 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157117
ACTTGGATATTATTGATAGTGGGTGGAGATGTTATTCCTTGAGACTTAACATTTCAGTCTCTGTTGAAGGTAATTCAGTTAGCTTCCACGGGTTTGAAGAGGTGCTTGAGGACTGGACAAAGACTGCTTACGGACCCCTCTGCTGAGATCTCTGGAACACAAAGTCAGTTTGTTTTCACAGTTTAGAAGAGGAGCATTGCAAGGAAAATGGGATCACCTCACTCAAAGCGCAAGTCTAAATCACAACATAGATCGCATGAATCATCCAAGTCAGTTTCCAGGCATGTGCTTGACCCTGTGGAAATTGCTGGCATTCCTACTTATTCGGTGAGCAATGCGTTGGTTCCGTCACATAGTAACAACAGCATCCAGAGGTCTATGAATGTACCAAGAAATGGGGCAATGACTCGACATTACAACAACTTTGATCAAGGTGTTGAAACATATCAACGTATAGTCATGAAGAACGGCCGGCCTGTTGAAACTGAAGAATACAGGATTTATTCAACTGATTAAAGCCTACTTGAAACTATGTCATGTCATCACATTAATTTAGATATGTAATTGCTTATGTAATGAAAATATGTGTACTAATGATGGCATCCAGCCAGCATCCAGAGGTCTATGGATATTCCAAGAAATGAGACTGAAGAATTCATGTTTTATTGGCTGCTTAAAAATAGGGAAAATATTTTTAATATATATATATATATATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157117 True 718 TUCP 0.39 5 995970 999181

Neighbor

gene id symbol gene type direction distance location
CI01000027_00980123_00987611 NA coding upstream 8086 979155 ~ 987884 (+)
CI01000027_00949578_00953698 NA coding upstream 41689 948721 ~ 954281 (+)
CI01000027_00909268_00918831 NA coding upstream 76757 908513 ~ 919213 (+)
CI01000027_00779517_00795032 NA coding upstream 200581 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 219207 765467 ~ 776763 (+)
CI01000027_01033975_01037549 NA coding downstream 33722 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 44211 1043392 ~ 1050863 (+)
CI01000027_01089832_01104918 NA coding downstream 90651 1089832 ~ 1104980 (+)
CI01000027_01119958_01123077 NA coding downstream 120249 1119430 ~ 1123099 (+)
CI01000027_01134221_01143363 NA coding downstream 132976 1132157 ~ 1143526 (+)
G138300 NA non-coding upstream 11271 984457 ~ 984699 (+)
G138277 NA non-coding upstream 26803 968941 ~ 969167 (+)
G138267 NA non-coding upstream 61472 933743 ~ 934498 (+)
G138247 NA non-coding upstream 102849 855388 ~ 893121 (+)
G138234 NA non-coding upstream 174701 815994 ~ 821269 (+)
G138309 NA non-coding downstream 4812 1003993 ~ 1004346 (+)
G138311 NA non-coding downstream 13696 1012877 ~ 1013154 (+)
G138312 NA non-coding downstream 15863 1015044 ~ 1015245 (+)
G138289 NA non-coding downstream 22340 1021521 ~ 1024940 (+)
CI01000027_01176638_01185141 NA non-coding downstream 180729 1175836 ~ 1185307 (+)
G138238 NA other upstream 164287 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 567294 390683 ~ 499760 (+)
G138030 NA other upstream 895713 39146 ~ 100257 (+)
G138436 NA other downstream 507780 1506961 ~ 1507816 (+)
G138515 NA other downstream 665227 1664408 ~ 1676860 (+)
G138915 NA other downstream 2485206 3484387 ~ 3486647 (+)
G138953 NA other downstream 2502891 3502072 ~ 3520065 (+)
G140436 NA other downstream 3738217 4737398 ~ 4774262 (+)

Expression


Co-expression Network