G138309


Basic Information

Item Value
gene id G138309
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1003993 ~ 1004346 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157136
GGCCTTCCGAAGTGAATCGATGCATTTGTGTAAAACAAATATCCTTATTTAAAACTTTATAAAGTAAAATAACGAGCTTCCGGCGCGACAGCCATACGCATTTGACGTATGTCCAAAAAGCGTTAGCTTCCGCGATGTAGTACACAATGACATGACATTCTACACAATGACATGATGTACTACGCGTTGTACTACTTCATTTTTTATGGATGAATGCATTTTTTCTGTCTTCAGAAATTGGGCTACCATTCACAACCATTACAAACCTTGGAGGAATAAGGATATTTTTAAAGAAAGAAGACATCGCTGAAGTCATATACACCTAGGATACACCAAATGAAAATTTGATGCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157136 True 354 lncRNA 0.37 1 1003993 1004346

Neighbor

gene id symbol gene type direction distance location
CI01000027_00980123_00987611 NA coding upstream 16109 979155 ~ 987884 (+)
CI01000027_00949578_00953698 NA coding upstream 49712 948721 ~ 954281 (+)
CI01000027_00909268_00918831 NA coding upstream 84780 908513 ~ 919213 (+)
CI01000027_00779517_00795032 NA coding upstream 208604 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 227230 765467 ~ 776763 (+)
CI01000027_01033975_01037549 NA coding downstream 28557 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 39046 1043392 ~ 1050863 (+)
CI01000027_01089832_01104918 NA coding downstream 85486 1089832 ~ 1104980 (+)
CI01000027_01119958_01123077 NA coding downstream 115084 1119430 ~ 1123099 (+)
CI01000027_01134221_01143363 NA coding downstream 127811 1132157 ~ 1143526 (+)
G138300 NA non-coding upstream 19294 984457 ~ 984699 (+)
G138277 NA non-coding upstream 34826 968941 ~ 969167 (+)
G138267 NA non-coding upstream 69495 933743 ~ 934498 (+)
G138247 NA non-coding upstream 110872 855388 ~ 893121 (+)
G138234 NA non-coding upstream 182724 815994 ~ 821269 (+)
G138311 NA non-coding downstream 8531 1012877 ~ 1013154 (+)
G138312 NA non-coding downstream 10698 1015044 ~ 1015245 (+)
G138289 NA non-coding downstream 17175 1021521 ~ 1024940 (+)
CI01000027_01176638_01185141 NA non-coding downstream 175564 1175836 ~ 1185307 (+)
G138350 NA non-coding downstream 210102 1214448 ~ 1214747 (+)
G138290 NA other upstream 4812 995970 ~ 999181 (+)
G138238 NA other upstream 172310 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 575317 390683 ~ 499760 (+)
G138057 NA other upstream 907266 93559 ~ 96727 (+)
G138436 NA other downstream 502615 1506961 ~ 1507816 (+)
G138515 NA other downstream 660062 1664408 ~ 1676860 (+)
G138915 NA other downstream 2480041 3484387 ~ 3486647 (+)
G138953 NA other downstream 2497726 3502072 ~ 3520065 (+)
G140436 NA other downstream 3733052 4737398 ~ 4774262 (+)

Expression


Co-expression Network