G139373


Basic Information

Item Value
gene id G139373
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1044041 ~ 1044379 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU158371
AAGTTATTAAATGGATGCTGCCTTTTTGGGAGAATAAAAACCCTCCCTACACCTTCCCCTAACCCTACCCAATAAATACTTTTAATATTATTAAACACTTGTTAGGCAGTTTATTTCCACTTTTAGAACATTATTTTCATTTTTATTGAAAATAAATGCCTTTCTGAGGTGATATATGATGGCAAAATGGAGAAGAGTGAGCGCAGCAAAAGGCGGACTCGAACCGTGAGTGTCCCAACCAGACATTGGTTTGCACTACCAATGCTATTTGCACTCTGTTTAAGATTTTGCACTATTATTTTACTATTTTCATTTATTATTATTATTATTCATTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158371 True 339 lncRNA 0.33 1 1044041 1044379

Neighbor

gene id symbol gene type direction distance location
CI01000027_00823197_00901936 THSD7AA, THSD7A coding downstream 142105 822225 ~ 901936 (-)
CI01000027_00808322_00809068 NA coding downstream 234973 808068 ~ 809068 (-)
CI01000027_00798826_00806532 ICA1 coding downstream 237509 798686 ~ 806532 (-)
CI01000027_00742700_00758723 COL28A1B coding downstream 285318 742631 ~ 758723 (-)
CI01000027_00701871_00719591 COL28A1B coding downstream 324450 701766 ~ 719591 (-)
CI01000027_01059994_01067301 RAB11A, RAB11AL, RAB25, RB11A coding upstream 14549 1058928 ~ 1067361 (-)
CI01000027_01072444_01076227 RAB25B, RAB25, RAA2A, RAB25A coding upstream 27636 1072015 ~ 1076227 (-)
CI01000027_01078554_01079951 MAPIP, ROBLD3-PS1, LAMTOR2.L, LAMTOR2.S, LAMTOR2 coding upstream 34057 1078436 ~ 1079951 (-)
CI01000027_01082314_01087880 UBQL4, XDRP1, UBQLN1, UBQLN4 coding upstream 37570 1081949 ~ 1088604 (-)
CI01000027_01111716_01114630 NA coding upstream 67299 1111678 ~ 1115560 (-)
G139364 NA non-coding downstream 14166 1028269 ~ 1029875 (-)
G139360 NA non-coding downstream 36619 1007194 ~ 1007422 (-)
G139359 NA non-coding downstream 38630 1005169 ~ 1005411 (-)
G139354 NA non-coding downstream 59297 984490 ~ 984744 (-)
G139382 NA non-coding upstream 64171 1108550 ~ 1108876 (-)
G139405 NA non-coding upstream 115667 1160046 ~ 1160265 (-)
G139406 NA non-coding upstream 116013 1160392 ~ 1160644 (-)
G139409 NA non-coding upstream 165867 1210246 ~ 1210464 (-)
G139117 NA other downstream 806462 234212 ~ 237579 (-)
CI01000027_00131884_00132650 NA other downstream 910239 131395 ~ 132650 (-)
CI01000027_00108990_00118237 NA other downstream 925738 108119 ~ 118408 (-)
CI01000027_01241417_01245177 NA other upstream 200256 1240478 ~ 1246267 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other upstream 257655 1302034 ~ 1321178 (-)
CI01000027_02119227_02124423 NA other upstream 1077751 2119131 ~ 2125142 (-)
CI01000027_02226447_02227499 NA other upstream 1182246 2225781 ~ 2227499 (-)
G140118 NA other upstream 2457155 3509352 ~ 3584679 (-)

Expression


Co-expression Network