G138376


Basic Information

Item Value
gene id G138376
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1295454 ~ 1295822 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157209
AGAATATGCAGGCTATTTCAAAGCTATTTTGTATTTTATGACACATCAATGACCTAAAACATATGCCACTTAAAATAATAATGTTCAACCAAAAACGAGAAGTAATTTACTCACTCTTTGTTTCGTTCCAAACGCATATGACTTTCTTTCTTCTGTGGAACACAAAATGAGAAGTTGAGAAACGTAAATTTAGTCTTCTAAAGCCATCAATAGCTGTGTGAAGAACAGACATCACTGATATTTAACTTAAAAAACACCATATTTGAATTTTTAGCTGAACTGTTCCTTTAAAGGGTTAGCTCATCCAAAAATGAAAATTCAGTCATTAATTACTCACTCTCATGTCGTTCCACACCTGTAAGACCTTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157209 True 369 lncRNA 0.33 1 1295454 1295822

Neighbor

gene id symbol gene type direction distance location
CI01000027_01176638_01185141 NA coding upstream 110147 1175836 ~ 1185307 (+)
CI01000027_01162273_01168513 NA coding upstream 126797 1162273 ~ 1168657 (+)
CI01000027_01153787_01158632 NA coding upstream 136453 1153787 ~ 1159001 (+)
CI01000027_01148208_01150893 NA coding upstream 144537 1148058 ~ 1150917 (+)
CI01000027_01134221_01143363 NA coding upstream 151928 1132157 ~ 1143526 (+)
CI01000027_01413155_01416305 NA coding downstream 117279 1413101 ~ 1417658 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding downstream 223445 1519267 ~ 1519776 (+)
CI01000027_01543335_01543974 NA coding downstream 247513 1543335 ~ 1544229 (+)
CI01000027_01546280_01571152 NTRK1 coding downstream 249921 1545743 ~ 1571220 (+)
CI01000027_01572250_01574108 NA coding downstream 276071 1571893 ~ 1574410 (+)
G138282 NA non-coding upstream 44844 1246723 ~ 1250610 (+)
G138360 NA non-coding upstream 57135 1237749 ~ 1238319 (+)
G138298 NA non-coding upstream 58905 1235859 ~ 1236549 (+)
G138357 NA non-coding upstream 69989 1220872 ~ 1225465 (+)
G138355 NA non-coding upstream 76576 1218653 ~ 1218878 (+)
G138407 NA non-coding downstream 56882 1352704 ~ 1352908 (+)
G138415 NA non-coding downstream 82284 1378106 ~ 1378854 (+)
G138453 NA non-coding downstream 163473 1459295 ~ 1459570 (+)
G138454 NA non-coding downstream 163945 1459767 ~ 1459984 (+)
G138455 NA non-coding downstream 164418 1460240 ~ 1460456 (+)
G138290 NA other upstream 296273 995970 ~ 999181 (+)
G138247 NA other upstream 425879 855388 ~ 893121 (+)
G138238 NA other upstream 463771 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 866778 390683 ~ 499760 (+)
G138057 NA other upstream 1198727 93559 ~ 96727 (+)
G138436 NA other downstream 211139 1506961 ~ 1507816 (+)
G138515 NA other downstream 368586 1664408 ~ 1676860 (+)
G138915 NA other downstream 2188565 3484387 ~ 3486647 (+)
G138953 NA other downstream 2206250 3502072 ~ 3520065 (+)
G140436 NA other downstream 3441576 4737398 ~ 4774262 (+)

Expression


Co-expression Network