G138415


Basic Information

Item Value
gene id G138415
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1378106 ~ 1378854 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157257
CACTGACAGGAAAGCACACAGGCTCCAGGGTTGAGGAAGTGAGGAAAAAAGAGAGACAGAAAGCGGGGGAGGGGCTGGGACACTATTTTTAGTGCAATTTTTTTCTTTCTGCGAGTGTCTCTCTGCGTCACAGATGAGGGGAGCGCAATGGACTGTGGCAGGTTTGTGTATTCTGTTCTTCAGTTTCACCCGGACTAATGTGCCGTTTGGCACCCGGTGTTCTGGTGAGAAGCAGACTAAACGCTCTCTGTCAACAGTAAAGCGGCGTCACCTTTCACCCTCACCATTCTCACAGTAACACACAAAAGACAAGGCAAAAGAGAAACTCTGACATAGAAGCTGCTGTCATCTAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCCACCCATCCATCCATCTGTCTGTCTTTCTATCTATCTATCTATCTATGTCTGTCAGTCTGTCTATCCATCCATTCATCCATGTCTGCCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATGTATGTCTGTCAGTCTGTCTATCCATCCATCCATCCATCCATTCATCCTTGTCTGCCCGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATGTCTGTCCATCCTTCCATCCATCCATCCATCCATCCATCC

Function

NR:

description
PREDICTED: chromogranin-A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157257 True 665 lncRNA 0.45 2 1378106 1378854

Neighbor

gene id symbol gene type direction distance location
CI01000027_01176638_01185141 NA coding upstream 192799 1175836 ~ 1185307 (+)
CI01000027_01162273_01168513 NA coding upstream 209449 1162273 ~ 1168657 (+)
CI01000027_01153787_01158632 NA coding upstream 219105 1153787 ~ 1159001 (+)
CI01000027_01148208_01150893 NA coding upstream 227189 1148058 ~ 1150917 (+)
CI01000027_01134221_01143363 NA coding upstream 234580 1132157 ~ 1143526 (+)
CI01000027_01413155_01416305 NA coding downstream 34247 1413101 ~ 1417658 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding downstream 140413 1519267 ~ 1519776 (+)
CI01000027_01543335_01543974 NA coding downstream 164481 1543335 ~ 1544229 (+)
CI01000027_01546280_01571152 NTRK1 coding downstream 166889 1545743 ~ 1571220 (+)
CI01000027_01572250_01574108 NA coding downstream 193039 1571893 ~ 1574410 (+)
G138407 NA non-coding upstream 25198 1352704 ~ 1352908 (+)
G138376 NA non-coding upstream 82284 1295454 ~ 1295822 (+)
G138282 NA non-coding upstream 127496 1246723 ~ 1250610 (+)
G138360 NA non-coding upstream 139787 1237749 ~ 1238319 (+)
G138298 NA non-coding upstream 141557 1235859 ~ 1236549 (+)
G138453 NA non-coding downstream 80441 1459295 ~ 1459570 (+)
G138454 NA non-coding downstream 80913 1459767 ~ 1459984 (+)
G138455 NA non-coding downstream 81386 1460240 ~ 1460456 (+)
G138430 NA non-coding downstream 82327 1461181 ~ 1462819 (+)
G138474 NA non-coding downstream 150867 1529721 ~ 1529926 (+)
G138290 NA other upstream 378925 995970 ~ 999181 (+)
G138247 NA other upstream 508531 855388 ~ 893121 (+)
G138238 NA other upstream 546423 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 949430 390683 ~ 499760 (+)
G138057 NA other upstream 1281379 93559 ~ 96727 (+)
G138436 NA other downstream 128107 1506961 ~ 1507816 (+)
G138515 NA other downstream 285554 1664408 ~ 1676860 (+)
G138915 NA other downstream 2105533 3484387 ~ 3486647 (+)
G138953 NA other downstream 2123218 3502072 ~ 3520065 (+)
G140436 NA other downstream 3358544 4737398 ~ 4774262 (+)

Expression


Co-expression Network