Gene
RNA
| Item | Value |
|---|---|
| gene id | G139457 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 1461180 ~ 1462825 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU158490 | True | 1646 | lncRNA | 0.36 | 1 | 1461180 | 1462825 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_01420180_01439837 | MTMR11 | coding | downstream | 21343 | 1420122 ~ 1439837 (-) |
| CI01000027_01361532_01381534 | SV2A | coding | downstream | 78414 | 1361288 ~ 1382766 (-) |
| CI01000027_01354194_01354663 | BOLA1 | coding | downstream | 106517 | 1354042 ~ 1354663 (-) |
| CI01000027_01327656_01344105 | NA | coding | downstream | 116332 | 1327626 ~ 1344848 (-) |
| CI01000027_01303308_01319462 | NR2F5, NR2F1, NR2F1.L, NR2F2 | coding | downstream | 140002 | 1302034 ~ 1321178 (-) |
| CI01000027_01466387_01475758 | OTUD7B | coding | upstream | 2722 | 1465547 ~ 1475758 (-) |
| CI01000027_01499088_01500312 | RBM8A | coding | upstream | 36215 | 1499040 ~ 1502028 (-) |
| CI01000027_01587854_01598407 | NA | coding | upstream | 124913 | 1587738 ~ 1598446 (-) |
| CI01000027_01610574_01630928 | SMG5 | coding | upstream | 147616 | 1610441 ~ 1630928 (-) |
| CI01000027_01651455_01676579 | SYNGAP1B | coding | upstream | 187986 | 1650811 ~ 1676579 (-) |
| G139514 | NA | non-coding | downstream | 127642 | 1333312 ~ 1333538 (-) |
| G139443 | NA | non-coding | downstream | 135919 | 1324926 ~ 1325261 (-) |
| G139436 | NA | non-coding | downstream | 162393 | 1296520 ~ 1298787 (-) |
| G139432 | NA | non-coding | downstream | 184690 | 1276290 ~ 1276490 (-) |
| G139424 | NA | non-coding | downstream | 217467 | 1241803 ~ 1243713 (-) |
| G139498 | NA | non-coding | upstream | 168 | 1462993 ~ 1463312 (-) |
| G139487 | NA | non-coding | upstream | 88260 | 1551085 ~ 1557170 (-) |
| G139553 | NA | non-coding | upstream | 145553 | 1608378 ~ 1609068 (-) |
| G139567 | NA | non-coding | upstream | 380551 | 1843376 ~ 1843598 (-) |
| G139568 | NA | non-coding | upstream | 381179 | 1844004 ~ 1844342 (-) |
| CI01000027_01241417_01245177 | NA | other | downstream | 214203 | 1240478 ~ 1246267 (-) |
| G139117 | NA | other | downstream | 1223601 | 234212 ~ 237579 (-) |
| CI01000027_00131884_00132650 | NA | other | downstream | 1327378 | 131395 ~ 132650 (-) |
| CI01000027_00108990_00118237 | NA | other | downstream | 1342877 | 108119 ~ 118408 (-) |
| CI01000027_02119227_02124423 | NA | other | upstream | 659305 | 2119131 ~ 2125142 (-) |
| CI01000027_02226447_02227499 | NA | other | upstream | 763800 | 2225781 ~ 2227499 (-) |
| G140118 | NA | other | upstream | 2038709 | 3509352 ~ 3584679 (-) |
| CI01000027_03787377_03788902 | NA | other | upstream | 2324553 | 3787377 ~ 3790279 (-) |
| CI01000027_03922380_03931033 | NA | other | upstream | 2459571 | 3922242 ~ 3931033 (-) |
