G138436


Basic Information

Item Value
gene id G138436
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1506961 ~ 1507816 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157281
TCAGGAAACTCTCGCCCAAACTGCAACCATGAAAATCTTCCTCATCGCCGTCCTTGTTGTTGCTCTGGCCATTGCCTCTGAGTCAGTATCTCTGGTCAAGAGAGATACTGAGATACAAGAGACACTCTCTCTGGTCAAGAGAGACTCTCCTGCTTTCATTAACAAGATCAAAGACTTTTTTGGGGGCAAGAAGAAGAACGAGGGCAAGAAGAACGAGGACAAGAAGAGCAATGAGGGTGCTGAGCAGGCCAACAAGGACAATGCTCCCCCCGAACAGACAAAGTAGACTAAATAAAACCAAAACCAAATAGAATCAACCATGTACAACTAACTAGAATCAATGGTGTTTATTTAACCTGAATGAATGGTTTTAGTTTAATTAAATAAAAGGCTTTCATTTAAATTGACATTAAAATAATCCTACAATTAATGCTTCTTGTTTAGTCCAGTGATTTACATAACAAAATAAATATAACTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157281 True 481 TUCP 0.39 3 1506961 1507816

Neighbor

gene id symbol gene type direction distance location
CI01000027_01413155_01416305 NA coding upstream 89303 1413101 ~ 1417658 (+)
CI01000027_01176638_01185141 NA coding upstream 321654 1175836 ~ 1185307 (+)
CI01000027_01162273_01168513 NA coding upstream 338304 1162273 ~ 1168657 (+)
CI01000027_01153787_01158632 NA coding upstream 347960 1153787 ~ 1159001 (+)
CI01000027_01148208_01150893 NA coding upstream 356044 1148058 ~ 1150917 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding downstream 11451 1519267 ~ 1519776 (+)
CI01000027_01543335_01543974 NA coding downstream 35519 1543335 ~ 1544229 (+)
CI01000027_01546280_01571152 NTRK1 coding downstream 37927 1545743 ~ 1571220 (+)
CI01000027_01572250_01574108 NA coding downstream 64077 1571893 ~ 1574410 (+)
CI01000027_01767031_01767683 NA coding downstream 258791 1766607 ~ 1767863 (+)
G138430 NA non-coding upstream 44142 1461181 ~ 1462819 (+)
G138455 NA non-coding upstream 46505 1460240 ~ 1460456 (+)
G138454 NA non-coding upstream 46977 1459767 ~ 1459984 (+)
G138453 NA non-coding upstream 47391 1459295 ~ 1459570 (+)
G138415 NA non-coding upstream 128107 1378106 ~ 1378854 (+)
G138474 NA non-coding downstream 21905 1529721 ~ 1529926 (+)
G138475 NA non-coding downstream 25154 1532970 ~ 1533422 (+)
G138491 NA non-coding downstream 74217 1582033 ~ 1582333 (+)
G138494 NA non-coding downstream 85459 1593275 ~ 1596468 (+)
G138508 NA non-coding downstream 125008 1632824 ~ 1647449 (+)
G138290 NA other upstream 507780 995970 ~ 999181 (+)
G138247 NA other upstream 637386 855388 ~ 893121 (+)
G138238 NA other upstream 675278 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 1078285 390683 ~ 499760 (+)
G138057 NA other upstream 1410234 93559 ~ 96727 (+)
G138515 NA other downstream 156592 1664408 ~ 1676860 (+)
G138915 NA other downstream 1976571 3484387 ~ 3486647 (+)
G138953 NA other downstream 1994256 3502072 ~ 3520065 (+)
G140436 NA other downstream 3229582 4737398 ~ 4774262 (+)
G140440 NA other downstream 3272601 4780417 ~ 4785660 (+)

Expression


Co-expression Network