G138594


Basic Information

Item Value
gene id G138594
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1789756 ~ 1793380 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157464
ATTACTTTTAAAAGTAACTTTCCAAAACACTCTAAATATTCTTACATTATATCTAAATATTTACTTACAAAATATCTTATATATACACAAAATATATCGTATATAAAACACTTCTGGAATGATATATTGCTTGCTGTTTCTGAAAGTAAGTCGTATGCATTATGTATTCAGTACAGATATCCGAATGGCCTACTATATTTGCAAAAATGTCCAGTATAAGACATTTTAACACAAAACTTAACTTTTAAAAATGTCTTGCATACTGTTTCACACACAACTTTTCAAAATATTCAATACACTAAACCTAGGCAGTATATACAGTCACAGTACACTAATATTCCATTCTAAACATTGTCATAGTCATGTGAGAATGTTATAAGTTGGACTCACTCTCCTGGTCCAGCACAATAGCAGTAACACTGCTGCTGGTTGGTCAAGTGCTGCGGGTCCCAGTCTAGAGATGACAGCTGATAGGGCAGCCGCACTTTCATGATCTGCATGAGCCGAGCGAAGCGTCCTCTTTTTAACGCTCCCCCTCTCTAGGACAGAACACAGCTCGTCATTACAATGTATCTCACCTCTCTGTGACAAGCGCTCTCCTGTCATGTAAGCACATTTAACAGCGATTTCATCTGAAGATTGAATTTGGAGAAGACACGCTGAAGGAAGTCATTAATATTTCCTGCTGCGGGGGGGTTGGTGAATATGATTTTATCTTCAAATCAGCATGTAAGGCCTGTGAAACGAGCGCGCTGACAGACGGATTAAAGCACAGGCCCATTTAACGCGGCTCTACCACCGCCATCACCTGCAGAGTGCTGCAATGTAATAAATACGCAGTCAAGTGCAGTAAGCCATGGATACCCTTTACATCTCAGAGCAAGATTAAAGCCTTGTGTTAGAATGTGTGTCATTGGAATTAGACCTTGAATGCCAACGTTGTCCATGTTTCTAAATATTCATTTCGGGATTTAAGCAAAGTACAACCTTTGTTGCGACTGCAAAGACACATTGGCGACATATCCAGCTGTTGGGGTCAACTTCAGGTTCAATGGGCGGGGTGTGGCACTCTGGATGATAACCGTGGCGACATTTGAGGCAGTTTACGAGAGGTTCTTTAAGAGGCGGAGCATCACAGATACAGCACACCTCCTCTCCTCCTGAAGAGAATGAGTGGATGTCTTTCCTGAGGACCCAGAATTCAGAGTTATCCTCAAATCTGACCAAACAGCACTGCTTGACACTGTCCACTCGTTTGACATTGCCAAGGTACAAAAGTCCATCGCTCCACCTGGCTAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157464 True 1302 lncRNA 0.42 4 1789756 1793380

Neighbor

gene id symbol gene type direction distance location
CI01000027_01767031_01767683 NA coding upstream 21893 1766607 ~ 1767863 (+)
CI01000027_01572250_01574108 NA coding upstream 215346 1571893 ~ 1574410 (+)
CI01000027_01546280_01571152 NTRK1 coding upstream 218536 1545743 ~ 1571220 (+)
CI01000027_01543335_01543974 NA coding upstream 245527 1543335 ~ 1544229 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding upstream 269980 1519267 ~ 1519776 (+)
CI01000027_01811625_01827803 RGL2 coding downstream 16377 1804199 ~ 1828182 (+)
CI01000027_01843365_01850501 FCGR2A coding downstream 49985 1843365 ~ 1850501 (+)
CI01000027_01850735_01853042 NA coding downstream 57355 1850735 ~ 1853513 (+)
CI01000027_01865502_01875022 HPN coding downstream 72122 1865502 ~ 1877374 (+)
CI01000027_01878501_01881301 NA coding downstream 85121 1878501 ~ 1882247 (+)
G138573 NA non-coding upstream 32968 1753206 ~ 1756788 (+)
G138541 NA non-coding upstream 40100 1740155 ~ 1749656 (+)
G138545 NA non-coding upstream 45918 1743056 ~ 1743838 (+)
G138519 NA non-coding upstream 85266 1673636 ~ 1704490 (+)
G138515 NA non-coding upstream 123323 1664408 ~ 1676860 (+)
G138558 NA non-coding downstream 40635 1834015 ~ 1840148 (+)
G138554 NA non-coding downstream 92854 1886234 ~ 1889683 (+)
G138549 NA non-coding downstream 97393 1890773 ~ 1903525 (+)
G138610 NA non-coding downstream 115862 1909242 ~ 1909468 (+)
G138436 NA other upstream 281940 1506961 ~ 1507816 (+)
G138290 NA other upstream 790575 995970 ~ 999181 (+)
G138247 NA other upstream 920181 855388 ~ 893121 (+)
G138238 NA other upstream 958073 829774 ~ 831683 (+)
G138915 NA other downstream 1691007 3484387 ~ 3486647 (+)
G138953 NA other downstream 1708692 3502072 ~ 3520065 (+)
G140436 NA other downstream 2944018 4737398 ~ 4774262 (+)
G140440 NA other downstream 2987037 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3255543 5050310 ~ 5055755 (+)

Expression


Co-expression Network