G138627


Basic Information

Item Value
gene id G138627
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1965332 ~ 1965606 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157506
AAAGAAATTAAGGTTTTTGATGAAAACATTCCAGGATTATTCTCCTTATAGTGGACTTCAATGGTCTCTCCAAACGGTTGAAGGTCAAAATGACAGTTTCAGTGCAGTTTCAAAGGGCTTTAAACGATACCAGACGAGAAATAAGGGTCTTATCTAGCAAAACGATCGGTCATTTTCTAAAAAAATACAAATGTATATGCTTTATAAACACAAATGATCGCCTTGCACGTGCTTCCGCTTTCCGTATTCTTCAAAAAGCTCACACTGTATGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157506 True 275 lncRNA 0.37 1 1965332 1965606

Neighbor

gene id symbol gene type direction distance location
CI01000027_01937897_01954661 NA coding upstream 10545 1937754 ~ 1954787 (+)
CI01000027_01926296_01931553 NA coding upstream 33646 1925958 ~ 1931686 (+)
CI01000027_01878501_01881301 NA coding upstream 83085 1878501 ~ 1882247 (+)
CI01000027_01865502_01875022 HPN coding upstream 88393 1865502 ~ 1877374 (+)
CI01000027_01850735_01853042 NA coding upstream 111819 1850735 ~ 1853513 (+)
CI01000027_01976509_01978931 NA coding downstream 10842 1976448 ~ 1980721 (+)
CI01000027_01982332_01985064 NA coding downstream 16428 1982034 ~ 1985157 (+)
CI01000027_01998746_02018404 NA coding downstream 33066 1998672 ~ 2018789 (+)
CI01000027_02034579_02038173 NA coding downstream 68754 2034360 ~ 2039054 (+)
CI01000027_02040721_02047487 NA coding downstream 75015 2040621 ~ 2047566 (+)
G138625 NA non-coding upstream 3476 1961552 ~ 1961856 (+)
G138612 NA non-coding upstream 53781 1911283 ~ 1911551 (+)
G138610 NA non-coding upstream 55864 1909242 ~ 1909468 (+)
G138549 NA non-coding upstream 61807 1890773 ~ 1903525 (+)
G138686 NA non-coding downstream 86974 2052580 ~ 2052935 (+)
G138672 NA non-coding downstream 111474 2077080 ~ 2082052 (+)
G138693 NA non-coding downstream 153592 2119198 ~ 2119793 (+)
G138649 NA non-coding downstream 183723 2149329 ~ 2153741 (+)
G138656 NA non-coding downstream 188963 2154569 ~ 2155082 (+)
G138515 NA other upstream 288472 1664408 ~ 1676860 (+)
G138436 NA other upstream 457516 1506961 ~ 1507816 (+)
G138290 NA other upstream 966151 995970 ~ 999181 (+)
G138247 NA other upstream 1095757 855388 ~ 893121 (+)
G138238 NA other upstream 1133649 829774 ~ 831683 (+)
G138915 NA other downstream 1518781 3484387 ~ 3486647 (+)
G138953 NA other downstream 1536466 3502072 ~ 3520065 (+)
G140436 NA other downstream 2771792 4737398 ~ 4774262 (+)
G140440 NA other downstream 2814811 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3083317 5050310 ~ 5055755 (+)

Expression


Co-expression Network