G139774


Basic Information

Item Value
gene id G139774
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2618629 ~ 2619107 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU158843
TAACACTTGCTATTGGTTCGAAGTCTTCCACTATTCAGTTCACAACACAGGAAAAATCAGATCACTCCGTGTGACTCCAACTCAACTGCTCCCAGAAGAAACATTTACAAGAATGGAAAAACATAGAAGCAAGGTCAAATTTCACAATTTCTGTAAAACTAAAAAAAAAAAAAAACCCTGAAAATATAACACCAGCATTCTCACAATTATAGCAGCCAGTGTGACAGCGGCTTGTAAATTTCAGTTTGAAACTTGTTCACAAGCGCGGCGCCCATAAATGTGAAATTGACCGTGAAAAGGGAGTTGTTTGGAGGGGGGCTGCTTCAATTGTCAAGGAGACAACAAGGTTGTCTCTCTGGACTATCAGGGGTGCCTTTTTTCTCTTTATTTCCCTCCGTCTCCTCTTTCAAATAAGGAGGCCCATCTTCTTCGACAGGCCTCAGGTTTCATGTTTATTCACGTTTGTGCGCTAGACTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158843 True 479 lncRNA 0.42 1 2618629 2619107

Neighbor

gene id symbol gene type direction distance location
CI01000027_02460101_02470648 DPYS coding downstream 147824 2459265 ~ 2470805 (-)
CI01000027_02314898_02317288 NA coding downstream 301321 2314551 ~ 2317308 (-)
CI01000027_02240021_02241453 NA coding downstream 377176 2239996 ~ 2241453 (-)
CI01000027_02226447_02227499 NA coding downstream 391130 2225781 ~ 2227499 (-)
CI01000027_02147653_02152768 NA coding downstream 465143 2147557 ~ 2153486 (-)
CI01000027_02742168_02773304 NA coding upstream 123061 2742168 ~ 2773304 (-)
CI01000027_02840202_02843749 NA coding upstream 220375 2839482 ~ 2845691 (-)
CI01000027_02950348_02954214 SQLE, SQLEA coding upstream 330999 2950106 ~ 2954214 (-)
CI01000027_02961909_02972343 RNF144B coding upstream 342657 2961764 ~ 2972343 (-)
CI01000027_02984235_02987159 CCDC127, CCDC127A coding upstream 364900 2984007 ~ 2987159 (-)
G139773 NA non-coding downstream 7919 2610455 ~ 2610710 (-)
G139771 NA non-coding downstream 12670 2605594 ~ 2605959 (-)
G139717 NA non-coding downstream 124999 2471126 ~ 2493630 (-)
G139705 NA non-coding downstream 192033 2425720 ~ 2426596 (-)
G139775 NA non-coding upstream 411 2619518 ~ 2619726 (-)
G139776 NA non-coding upstream 689 2619796 ~ 2620095 (-)
G139777 NA non-coding upstream 3291 2622398 ~ 2622979 (-)
G139778 NA non-coding upstream 8976 2628083 ~ 2628342 (-)
G139784 NA non-coding upstream 20184 2639291 ~ 2640043 (-)
CI01000027_02119227_02124423 NA other downstream 492601 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 1298468 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 1371652 1240478 ~ 1246267 (-)
G139117 NA other downstream 2381050 234212 ~ 237579 (-)
G140118 NA other upstream 882427 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 1168271 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 1303289 3922242 ~ 3931033 (-)
G141481 NA other upstream 1753140 4372247 ~ 4412810 (-)
G141488 NA other upstream 1888368 4507475 ~ 4508971 (-)

Expression


Co-expression Network