G138775


Basic Information

Item Value
gene id G138775
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2732818 ~ 2733295 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157677
GGAGAATCGGTTGGAAAAGCTGGCCTGAACTCCCATGCTGTACATGTGAAGGGTTTGAACAAGTCTTTTTTCATCACTGCATGATGAAGTTAGGCTTTGTTTGACATGGAGTACTAGAATACTCTTACTGTTGCTGCTATTTTAAGTAGACATTATGCAGAAAGCACTACTGCATTTGCCAAAAATATGAAGAGTCACTGTATCCATCAATGCATAGTGCTCAATTTGAACTGCCGTTTCCAGCGTGATGGACAAACTGGAAGTAATGATACAAAAGTATATTAAAAATGCAATGCTTTAATTTCCAAAATGATAACGGGCAGCAGTGGGGTTTTTTTTTTTTTTTTTGGTTTTTTTAACAGGTTGCAGGTATATTCTGATAAGGTCACAGAATTGTAGGGTGAAACAATGATGAATGCTAATAATTAAATGTATAATCATGAACCATATAATCATGTATATTAATAGCAAAATAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157677 True 478 lncRNA 0.35 1 2732818 2733295

Neighbor

gene id symbol gene type direction distance location
CI01000027_02530086_02589227 NA coding upstream 143342 2529638 ~ 2589476 (+)
CI01000027_02492454_02508459 NA coding upstream 224216 2492077 ~ 2508602 (+)
CI01000027_02455787_02458435 DCSTAMP coding upstream 273774 2455153 ~ 2459044 (+)
CI01000027_02429134_02451902 RIMS2A, RIMS2 coding upstream 280283 2427563 ~ 2452535 (+)
CI01000027_02419674_02422700 NA coding upstream 309690 2419633 ~ 2423128 (+)
CI01000027_02895512_02924151 NA coding downstream 162217 2895512 ~ 2924197 (+)
CI01000027_02941870_02946290 OXR1 coding downstream 208575 2941870 ~ 2948777 (+)
CI01000027_02981155_02982628 NA coding downstream 247716 2981011 ~ 2982885 (+)
CI01000027_02991231_02994560 PSMA2 coding downstream 257936 2991231 ~ 2994717 (+)
CI01000027_02995394_03005981 ATAD2 coding downstream 262099 2995394 ~ 3005997 (+)
G138687 NA non-coding upstream 10459 2716814 ~ 2722359 (+)
G138661 NA non-coding upstream 16260 2703364 ~ 2716558 (+)
G138658 NA non-coding upstream 29593 2696075 ~ 2703225 (+)
G138655 NA non-coding upstream 38813 2683919 ~ 2694005 (+)
CI01000027_02611537_02740618 ZFPM2, ZFPM2A non-coding upstream 61692 2611537 ~ 2740618 (+)
G138802 NA non-coding downstream 230522 2963817 ~ 2970808 (+)
G138817 NA non-coding downstream 255393 2988688 ~ 2988933 (+)
G138828 NA non-coding downstream 383075 3116370 ~ 3116659 (+)
G138830 NA non-coding downstream 388996 3122291 ~ 3122705 (+)
G138515 NA other upstream 1055958 1664408 ~ 1676860 (+)
G138436 NA other upstream 1225002 1506961 ~ 1507816 (+)
G138290 NA other upstream 1733637 995970 ~ 999181 (+)
G138247 NA other upstream 1863243 855388 ~ 893121 (+)
G138238 NA other upstream 1901135 829774 ~ 831683 (+)
G138915 NA other downstream 751092 3484387 ~ 3486647 (+)
G138953 NA other downstream 768777 3502072 ~ 3520065 (+)
G140436 NA other downstream 2004103 4737398 ~ 4774262 (+)
G140440 NA other downstream 2047122 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2315628 5050310 ~ 5055755 (+)

Expression


Co-expression Network